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    H19 H19, imprinted maternally expressed transcript [ Mus musculus (house mouse) ]

    Gene ID: 14955, updated on 27-Jul-2021

    Summary

    Official Symbol
    H19provided by MGI
    Official Full Name
    H19, imprinted maternally expressed transcriptprovided by MGI
    Primary source
    MGI:MGI:95891
    See related
    Ensembl:ENSMUSG00000000031
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AI747191; EyeLinc6
    Expression
    Biased expression in liver E18 (RPKM 5536.3), placenta adult (RPKM 4196.2) and 5 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See H19 in Genome Data Viewer
    Location:
    7 F5; 7 87.97 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (142129267..142131883, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (142575530..142578146, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (149761437..149764051, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L23 Neighboring gene H19/Igf2 enhancer region Neighboring gene non-coding transcript 1 Neighboring gene microRNA 675 Neighboring gene H19/Igf2 imprinting control region Neighboring gene H19 upstream conserved region 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (10)  1 citation
    • Endonuclease-mediated (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Other Names

    • H19 fetal liver mRNA

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_130973.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript.
      Source sequence(s)
      AK145379, BY770825, W75219
      Related
      ENSMUST00000136359.8
    2. NR_130974.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) uses an alternate splice site in an internal exon, compared to variant 1.
      Source sequence(s)
      AK145379, BY770825, CV561038, W75219

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      142129267..142131883 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_023123.1: Suppressed sequence

      Description
      NM_023123.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.
    2. NR_001592.1: Suppressed sequence

      Description
      NR_001592.1: This RefSeq was permanently suppressed because the transcript retains intronic sequences.
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