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    9530057J20Rik RIKEN cDNA 9530057J20 gene [ Mus musculus (house mouse) ]

    Gene ID: 78672, updated on 24-Jul-2021

    Summary

    Official Symbol
    9530057J20Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 9530057J20 geneprovided by MGI
    Primary source
    MGI:MGI:1925922
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm31371
    Expression
    Biased expression in testis adult (RPKM 59.5) and frontal lobe adult (RPKM 3.1) See more
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    Genomic context

    See 9530057J20Rik in Genome Data Viewer
    Location:
    8 A2; 8
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (20478979..20510931)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (19903378..19935330)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene cadherin 11 pseudogene Neighboring gene NSFL1 (p97) cofactor (p47) pseudogene Neighboring gene predicted gene, 40468 Neighboring gene mitochondrial import receptor subunit TOM20 homolog Neighboring gene predicted gene, 36166

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    cell surface glycoprotein 1; uncharacterized protein LOC78672

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      20478979..20510931
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030243910.1XP_030099770.1  cell surface glycoprotein 1

      Conserved Domains (2) summary
      PHA03247
      Location:229652
      PHA03247; large tegument protein UL36; Provisional
      cl39094
      Location:250
      Ank_2; Ankyrin repeats (3 copies)
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