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    Serpinb2 serine (or cysteine) peptidase inhibitor, clade B, member 2 [ Mus musculus (house mouse) ]

    Gene ID: 18788, updated on 12-May-2024

    Summary

    Official Symbol
    Serpinb2provided by MGI
    Official Full Name
    serine (or cysteine) peptidase inhibitor, clade B, member 2provided by MGI
    Primary source
    MGI:MGI:97609
    See related
    Ensembl:ENSMUSG00000062345 AllianceGenome:MGI:97609
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    PAI-2; Planh2; ovalbumin
    Summary
    Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to be involved in negative regulation of endopeptidase activity and wound healing. Predicted to act upstream of or within negative regulation of peptidase activity. Predicted to be located in cytoplasm and extracellular region. Predicted to be active in extracellular space. Is expressed in several structures, including genitourinary system; immune system; mesothelium; respiratory system; and skin. Orthologous to human SERPINB2 (serpin family B member 2). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in liver E14 (RPKM 1.2), liver E14.5 (RPKM 1.0) and 14 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Serpinb2 in Genome Data Viewer
    Location:
    1 E2.1; 1 50.34 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (107439153..107453330)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (107500892..107525600)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11 Neighboring gene serine (or cysteine) peptidase inhibitor, clade B, member 7 Neighboring gene STARR-positive B cell enhancer mm9_chr1:109342973-109343273 Neighboring gene STARR-positive B cell enhancer mm9_chr1:109343789-109344089 Neighboring gene predicted gene, 24553 Neighboring gene STARR-seq mESC enhancer starr_01868 Neighboring gene serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 10 Neighboring gene SCAN domain containing 3 pseudogene Neighboring gene serine (or cysteine) peptidase inhibitor, clade B, member 8

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables peptidase inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables serine-type endopeptidase inhibitor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in negative regulation of apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of endopeptidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within negative regulation of peptidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cornified envelope IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    plasminogen activator inhibitor 2, macrophage
    Names
    plasminogen activator inhibitor, type II
    serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2
    serine (or cysteine) proteinase inhibitor, clade B, member 2
    serpin B2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001174170.1NP_001167641.1  plasminogen activator inhibitor 2, macrophage

      See identical proteins and their annotated locations for NP_001167641.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Both variants encode the same protein.
      Source sequence(s)
      AI847983, AK081487
      Consensus CDS
      CCDS15219.1
      UniProtKB/Swiss-Prot
      O35687, P12388, Q9QWP6, Q9QWP7, Q9QWP8, Q9QWP9, Q9QWQ0, Q9QWZ5, Q9QWZ6
      UniProtKB/TrEMBL
      Q542A3
      Related
      ENSMUSP00000009356.5, ENSMUST00000009356.11
      Conserved Domains (1) summary
      cl00137
      Location:4415
      SERPIN; SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate ...
    2. NM_011111.4NP_035241.1  plasminogen activator inhibitor 2, macrophage

      See identical proteins and their annotated locations for NP_035241.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript. Both variants encode the same protein.
      Source sequence(s)
      AI847983, AK090049, BY195599
      Consensus CDS
      CCDS15219.1
      UniProtKB/Swiss-Prot
      O35687, P12388, Q9QWP6, Q9QWP7, Q9QWP8, Q9QWP9, Q9QWQ0, Q9QWZ5, Q9QWZ6
      UniProtKB/TrEMBL
      Q542A3
      Related
      ENSMUSP00000065277.3, ENSMUST00000064916.9
      Conserved Domains (1) summary
      cl00137
      Location:4415
      SERPIN; SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate ...

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      107439153..107453330
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)