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    AT3G23160 plant/protein (DUF668) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821892, updated on 15-Feb-2024

    Summary

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    Gene symbol
    AT3G23160
    Gene description
    plant/protein (DUF668)
    Primary source
    Araport:AT3G23160
    Locus tag
    AT3G23160
    See related
    TAIR:AT3G23160
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    See AT3G23160 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (8259774..8262089, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ATP binding / aminoacyl-tRNA ligase/ nucleotide binding protein Neighboring gene Signal transduction histidine kinase, hybrid-type, ethylene sensor Neighboring gene low-molecular-weight cysteine-rich 42 Neighboring gene low-molecular-weight cysteine-rich 39

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713
    2. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_113217.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in positive regulation of growth IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    plant/protein (DUF668)
    NP_188957.2
    • Protein of unknown function (DUF668); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700), Protein of unknown function DUF3475 (InterPro:IPR021864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT5G04550.1); Has 431 Blast hits to 290 proteins in 19 species: Archae - 0; Bacteria - 1; Metazoa - 0; Fungi - 0; Plants - 424; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      8259774..8262089 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113217.3 → NP_188957.2  plant/protein (DUF668) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188957.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VED2, A0A384L5C3, A0A654FB62, Q0WVR1, Q9LTD4
      Conserved Domains (2) summary
      pfam05003
      Location:360 → 448
      DUF668; Protein of unknown function (DUF668)
      pfam11961
      Location:45 → 101
      DUF3475; Domain of unknown function (DUF3475)
    Nucleotide Protein
    Heading Accession and Version

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