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    YKR041W uncharacterized protein [ Saccharomyces cerevisiae S288C ]

    Gene ID: 853914, updated on 17-May-2024

    Summary

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    Gene symbol
    YKR041W
    Gene description
    uncharacterized protein
    Primary source
    FungiDB:YKR041W
    Locus tag
    YKR041W
    See related
    SGD:S000001749; AllianceGenome:SGD:S000001749
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Located in mitotic spindle and nucleus. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See YKR041W in Genome Data Viewer
    Location:
    chromosome: XI
    Exon count:
    1
    Sequence:
    Chromosome: XI; NC_001143.9 (518198..518950)

    Chromosome XI - NC_001143.9Genomic Context describing neighboring genes Neighboring gene amino acid permease GAP1 Neighboring gene tRNA-Ala Neighboring gene SUN family protein UTH1 Neighboring gene sedoheptulose-bisphosphatase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001143.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Decyl Gallate as a Possible Inhibitor of N-Glycosylation Process in Paracoccidioides lutzii. de Paula E Silva ACA, et al. Antimicrob Agents Chemother, 2019 Nov. PMID 31451502, Free PMC Article
    2. An overexpression screen in Saccharomyces cerevisiae identifies novel genes that affect endocytic protein trafficking. Arlt H, et al. Traffic, 2011 Nov. PMID 21777356
    3. Brr2p carboxy-terminal Sec63 domain modulates Prp16 splicing RNA helicase. Cordin O, et al. Nucleic Acids Res, 2014 Dec 16. PMID 25428373, Free PMC Article
    4. Linking functionally related genes by sensitive and quantitative characterization of genetic interaction profiles. Decourty L, et al. Proc Natl Acad Sci U S A, 2008 Apr 15. PMID 18408161, Free PMC Article
    5. Yeast Ssd1 is a non-enzymatic member of the RNase II family with an alternative RNA recognition site. Bayne RA, et al. Nucleic Acids Res, 2022 Mar 21. PMID 34302485, Free PMC Article

    See all (19) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm HDA PubMed 
    located_in mitotic spindle IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus HDA PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_012967.1
    • hypothetical protein; localizes to the mitotic spindle; overexpression of YKR041W affects endocytic protein trafficking

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001143.9 Reference assembly

      Range
      518198..518950
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001179831.1 → NP_012967.1  TPA: uncharacterized protein YKR041W [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_012967.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6VXA3, P36134
      UniProtKB/TrEMBL
      A0A8H4BYD3, G2WI70, N1P833
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P36134.1

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