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    LOC100911508 uncharacterized LOC100911508 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 100911508, updated on 29-Feb-2024

    Summary

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    Symbol
    LOC100911508provided by RGD
    Full Name
    uncharacterized LOC100911508provided by RGD
    Primary source
    RGD:6492288
    See related
    AllianceGenome:RGD:6492288
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Expression
    Biased expression in Heart (RPKM 80.4) and Adrenal (RPKM 7.7) See more
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    Genomic context

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    See LOC100911508 in Genome Data Viewer
    Location:
    3q21
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (70146004..70154135, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (49737890..49746043, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (51120625..51128868, complement)

    Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene glutamine amidotransferase class 1 domain containing 1, pseudogene 1 Neighboring gene growth factor receptor bound protein 14 Neighboring gene U4 spliceosomal RNA Neighboring gene uncharacterized LOC120101557 Neighboring gene cordon-bleu WH2 repeat protein-like 1 Neighboring gene U7 small nuclear RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086021.1 Reference GRCr8

      Range
      70146004..70154135 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_145872.5 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases