cct7.S chaperonin containing TCP1 subunit 7 S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: cct7.S
Official Full Name: chaperonin containing TCP1 subunit 7 S homeolog
Primary source: Xenbase:XB-GENE-988126
Locus tag: XELAEV_18008749mg
See related: EnsemblRapid:ENSXLAG00005000587
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: cct7
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Genomic context

Location:: chromosome: 1S

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	1S	NC_054372.1 (3034842..3042345, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	1S	NC_030725.1 (2905423..2912976, complement)

Chromosome 1S - NC_054372.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables ATP binding	IEA Inferred from Electronic Annotation more info
enables ATP hydrolysis activity	IEA Inferred from Electronic Annotation more info
enables ATP-dependent protein folding chaperone	IEA Inferred from Electronic Annotation more info
enables unfolded protein binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within protein folding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of chaperonin-containing T-complex	IEA Inferred from Electronic Annotation more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: chaperonin containing TCP1, subunit 7

Names: chaperonin containing TCP1, subunit 7 (eta)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001093568.1 → NP_001087037.1 chaperonin containing TCP1, subunit 7

See identical proteins and their annotated locations for NP_001087037.1

Status: PROVISIONAL

Source sequence(s)

BC077927

UniProtKB/TrEMBL

Q6DCS0, Q7ZXA9

Related

ENSXLAP00005001608.1, ENSXLAT00005001648.1

Conserved Domains (2) summary

cd03340
Location:5 → 525

TCP1_eta; TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), ...

TIGR02345
Location:3 → 525

chap_CCT_eta; T-complex protein 1, eta subunit