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    AT1G16000 GAG1At protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838170, updated on 15-Oct-2023

    Summary

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    Gene symbol
    AT1G16000
    Gene description
    GAG1At protein
    Primary source
    Araport:AT1G16000
    Locus tag
    AT1G16000
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T24D18.10; T24D18_10
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    Genomic context

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    See AT1G16000 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (5494533..5495359)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene DNA glycosylase superfamily protein Neighboring gene NDH-dependent cyclic electron flow 1 Neighboring gene cyclic nucleotide gated channel 7 Neighboring gene magnesium transporter 2 Neighboring gene vacuolar fusion protein (DUF1712) Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Distinct pathways mediate the sorting of tail-anchored proteins to the plastid outer envelope. Dhanoa PK, et al. PLoS One, 2010 Apr 14. PMID 20418952, Free PMC Article
    2. An RK/ST C-Terminal Motif is Required for Targeting of OEP7.2 and a Subset of Other Arabidopsis Tail-Anchored Proteins to the Plastid Outer Envelope Membrane. Teresinski HJ, et al. Plant Cell Physiol, 2019 Mar 1. PMID 30521026
    3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_101468.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    colocalizes_with plastid outer membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    GAG1At protein
    NP_563987.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80890.1); Has 41 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      5494533..5495359
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101468.2 → NP_563987.1  GAG1At protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_563987.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WCL1, A0A7G2DTJ5, P93048
    Nucleotide Protein
    Heading Accession and Version

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