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    Fam91a1 family with sequence similarity 91, member A1 [ Mus musculus (house mouse) ]

    Gene ID: 210998, updated on 5-Mar-2024

    Summary

    Official Symbol
    Fam91a1provided by MGI
    Official Full Name
    family with sequence similarity 91, member A1provided by MGI
    Primary source
    MGI:MGI:1277178
    See related
    Ensembl:ENSMUSG00000037119 AllianceGenome:MGI:1277178
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    SKIN; mKIAA0493; D15Ertd621e
    Summary
    Predicted to be involved in intracellular protein transport and vesicle tethering to Golgi. Predicted to be located in Golgi apparatus. Predicted to be active in cytoplasmic vesicle and trans-Golgi network. Is expressed in carpus; lower jaw; and skeleton. Orthologous to human FAM91A1 (family with sequence similarity 91 member A1). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Ubiquitous expression in bladder adult (RPKM 20.5), placenta adult (RPKM 18.7) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    Location:
    15 D1; 15 24.76 cM
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (58277868..58329655)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (58405907..58457801)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_38752 Neighboring gene STARR-seq mESC enhancer starr_38753 Neighboring gene kelch-like 38 Neighboring gene predicted gene, 53238 Neighboring gene annexin A13 Neighboring gene STARR-positive B cell enhancer ABC_E7369 Neighboring gene STARR-seq mESC enhancer starr_38755 Neighboring gene STARR-seq mESC enhancer starr_38756 Neighboring gene STARR-seq mESC enhancer starr_38757 Neighboring gene fer-1 like family member 6 Neighboring gene STARR-seq mESC enhancer starr_38758 Neighboring gene predicted gene, 36451 Neighboring gene STARR-seq mESC enhancer starr_38759 Neighboring gene predicted gene, 41329

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Transgenic (1) 
    • Endonuclease-mediated (2) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC40987

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in intracellular protein transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in intracellular protein transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in vesicle tethering to Golgi IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in vesicle tethering to Golgi ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in cytoplasmic vesicle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasmic vesicle ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in trans-Golgi network IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in trans-Golgi network ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    protein FAM91A1
    Names
    skeletal muscle cells re-entry induced

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001416207.1NP_001403136.1  protein FAM91A1 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC107742
    2. NM_145959.4NP_666071.2  protein FAM91A1 isoform 1

      See identical proteins and their annotated locations for NP_666071.2

      Status: VALIDATED

      Source sequence(s)
      AC107742
      Consensus CDS
      CCDS37080.1
      UniProtKB/Swiss-Prot
      Q3UVG3, Q80TZ0, Q8K077
      UniProtKB/TrEMBL
      B6YY24
      Related
      ENSMUSP00000036524.4, ENSMUST00000037270.5
      Conserved Domains (2) summary
      pfam14647
      Location:10312
      FAM91_N; FAM91 N-terminus
      pfam14648
      Location:374821
      FAM91_C; FAM91 C-terminus

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      58277868..58329655
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006520705.4XP_006520768.1  protein FAM91A1 isoform X2

      See identical proteins and their annotated locations for XP_006520768.1

      Conserved Domains (2) summary
      pfam14647
      Location:1237
      FAM91_N; FAM91 N-terminus
      pfam14648
      Location:299746
      FAM91_C; FAM91 C-terminus
    2. XM_006520706.3XP_006520769.1  protein FAM91A1 isoform X2

      See identical proteins and their annotated locations for XP_006520769.1

      Conserved Domains (2) summary
      pfam14647
      Location:1237
      FAM91_N; FAM91 N-terminus
      pfam14648
      Location:299746
      FAM91_C; FAM91 C-terminus