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    Mid1ip1 Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish)) [ Mus musculus (house mouse) ]

    Gene ID: 68041, updated on 25-Jan-2022

    Summary

    Official Symbol
    Mid1ip1provided by MGI
    Official Full Name
    Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))provided by MGI
    Primary source
    MGI:MGI:1915291
    See related
    Ensembl:ENSMUSG00000008035 AllianceGenome:MGI:1915291
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    S14R; Mig12; 3110038L01Rik
    Summary
    Enables identical protein binding activity and protein C-terminus binding activity. Involved in positive regulation of fatty acid biosynthetic process; positive regulation of ligase activity; and protein polymerization. Acts upstream of or within negative regulation of microtubule depolymerization. Located in cytosol; microtubule cytoskeleton; and nucleus. Is expressed in several structures, including adipose tissue; alimentary system; genitourinary system; limb segment; and nervous system. Orthologous to human MID1IP1 (MID1 interacting protein 1). [provided by Alliance of Genome Resources, Nov 2021]
    Expression
    Ubiquitous expression in genital fat pad adult (RPKM 87.4), lung adult (RPKM 68.5) and 26 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Mid1ip1 in Genome Data Viewer
    Location:
    X; X A1.1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) X NC_000086.8 (10583604..10585941)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (10717365..10719702)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) X NC_000086.6 (10294491..10296828)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene lactate dehydrogenase A pseudogene Neighboring gene calmodulin 2 pseudogene Neighboring gene predicted gene, 33984 Neighboring gene predicted gene, 39494

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables identical protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein C-terminus binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in microtubule IEA
    Inferred from Electronic Annotation
    more info
     
    located_in microtubule cytoskeleton IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    mid1-interacting protein 1
    Names
    gastrulation-specific G12-like protein
    mid1-interacting G12-like protein
    protein STRAIT11499 homolog
    spot 14-R
    spot 14-related protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001166635.1NP_001160107.1  mid1-interacting protein 1

      See identical proteins and their annotated locations for NP_001160107.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 encode the same protein.
      Source sequence(s)
      AL671335
      Consensus CDS
      CCDS30018.1
      UniProtKB/Swiss-Prot
      Q9CQ20
      UniProtKB/TrEMBL
      Q4FK31
      Related
      ENSMUSP00000111186.2, ENSMUST00000115524.8
      Conserved Domains (1) summary
      pfam07084
      Location:3176
      Spot_14; Thyroid hormone-inducible hepatic protein Spot 14
    2. NM_026524.4NP_080800.1  mid1-interacting protein 1

      See identical proteins and their annotated locations for NP_080800.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) uses a different splice site in the 5' UTR, compared to variant 1. Variants 1 and 2 encode the same protein.
      Source sequence(s)
      AL671335
      Consensus CDS
      CCDS30018.1
      UniProtKB/Swiss-Prot
      Q9CQ20
      UniProtKB/TrEMBL
      Q4FK31
      Related
      ENSMUSP00000008179.7, ENSMUST00000008179.7
      Conserved Domains (1) summary
      pfam07084
      Location:3176
      Spot_14; Thyroid hormone-inducible hepatic protein Spot 14

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      10583604..10585941
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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