U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Lao1 L-amino acid oxidase 1 [ Mus musculus (house mouse) ]

    Gene ID: 100470, updated on 12-May-2024

    Summary

    Official Symbol
    Lao1provided by MGI
    Official Full Name
    L-amino acid oxidase 1provided by MGI
    Primary source
    MGI:MGI:2140628
    See related
    Ensembl:ENSMUSG00000024903 AllianceGenome:MGI:2140628
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Enables L-amino-acid oxidase activity. Acts upstream of or within cellular amino acid catabolic process. Located in extracellular region. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Low expression observed in reference dataset See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Lao1 in Genome Data Viewer
    Location:
    4 D2.1; 4 55.24 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (118819164..118826107)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (118961967..118968910)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene 12865 Neighboring gene predicted gene 12856 Neighboring gene predicted gene 12863 Neighboring gene predicted gene, 24352 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Targeted (1)  1 citation

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables L-amino-acid oxidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables L-amino-acid oxidase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables polyamine oxidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in amino acid catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within amino acid catabolic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IDA
    Inferred from Direct Assay
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_133892.4NP_598653.3  L-amino acid oxidase 1 precursor

      See identical proteins and their annotated locations for NP_598653.3

      Status: VALIDATED

      Source sequence(s)
      AK052781, AL606922
      Consensus CDS
      CCDS18568.1
      UniProtKB/TrEMBL
      B1ARV3, Q8VEN4
      Related
      ENSMUSP00000062834.5, ENSMUST00000058651.5
      Conserved Domains (2) summary
      pfam01593
      Location:67508
      Amino_oxidase; Flavin containing amine oxidoreductase
      pfam13450
      Location:62129
      NAD_binding_8; NAD(P)-binding Rossmann-like domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      118819164..118826107
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)