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    Osmr oncostatin M receptor [ Mus musculus (house mouse) ]

    Gene ID: 18414, updated on 21-Apr-2024

    Summary

    Official Symbol
    Osmrprovided by MGI
    Official Full Name
    oncostatin M receptorprovided by MGI
    Primary source
    MGI:MGI:1330819
    See related
    Ensembl:ENSMUSG00000022146 AllianceGenome:MGI:1330819
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    OSMRB
    Summary
    Enables cytokine binding activity and oncostatin-M receptor activity. Predicted to be involved in oncostatin-M-mediated signaling pathway and positive regulation of cell population proliferation. Predicted to act upstream of or within cell surface receptor signaling pathway. Located in external side of plasma membrane. Is expressed in several structures, including cardiovascular system; hemolymphoid system; lung; sensory organ; and skeletal system. Human ortholog(s) of this gene implicated in primary localized cutaneous amyloidosis 1. Orthologous to human OSMR (oncostatin M receptor). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Broad expression in bladder adult (RPKM 9.5), subcutaneous fat pad adult (RPKM 5.8) and 18 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    Location:
    15 A1; 15 3.3 cM
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (6843049..6904434, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (6813568..6874968, complement)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene FYN binding protein 1 Neighboring gene predicted gene 2245 Neighboring gene STARR-seq mESC enhancer starr_37866 Neighboring gene prohibitin pseudogene Neighboring gene STARR-seq mESC enhancer starr_37870 Neighboring gene RPTOR independent companion of MTOR, complex 2 Neighboring gene predicted gene, 53882 Neighboring gene STARR-seq mESC enhancer starr_37871 Neighboring gene STARR-seq mESC enhancer starr_37872 Neighboring gene predicted gene, 41261 Neighboring gene predicted gene, 30559 Neighboring gene predicted gene, 30663

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2)  1 citation
    • Endonuclease-mediated (4) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables ciliary neurotrophic factor receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables cytokine binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables cytokine binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables cytokine receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables growth factor binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables oncostatin-M receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    contributes_to oncostatin-M receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in apical plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in external side of plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in external side of plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    part_of oncostatin-M receptor complex ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane TAS
    Traceable Author Statement
    more info
    PubMed 
    part_of receptor complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    oncostatin-M-specific receptor subunit beta
    Names
    IL-31 receptor subunit beta
    IL-31R subunit beta
    IL-31R-beta
    IL-31RB
    interleukin-31 receptor subunit beta
    oncostatin receptor

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001310469.2NP_001297398.1  oncostatin-M-specific receptor subunit beta isoform 2 precursor

      See identical proteins and their annotated locations for NP_001297398.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) uses an alternate, in-frame acceptor splice site in the 3' coding region compared to variant 1. The resulting isoform (2) is 1 amino acid shorter than isoform 1.
      Source sequence(s)
      AC102825, AC109183
      Consensus CDS
      CCDS79358.1
      UniProtKB/Swiss-Prot
      O70458, O88821
      UniProtKB/TrEMBL
      A0A0R4J268, B9EHD2
      Related
      ENSMUSP00000135204.2, ENSMUST00000176826.2
      Conserved Domains (4) summary
      smart00060
      Location:437512
      FN3; Fibronectin type 3 domain
      cd00063
      Location:621729
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:332413
      fn3; Fibronectin type III domain
      cl21522
      Location:230289
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    2. NM_011019.4NP_035149.2  oncostatin-M-specific receptor subunit beta isoform 1 precursor

      See identical proteins and their annotated locations for NP_035149.2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) encodes the longer isoform (1)
      Source sequence(s)
      AC102825, AC109183
      Consensus CDS
      CCDS27368.1
      UniProtKB/Swiss-Prot
      O70458, O88821
      UniProtKB/TrEMBL
      B9EHD2, G3X8V6
      Related
      ENSMUSP00000022746.7, ENSMUST00000022746.13
      Conserved Domains (4) summary
      smart00060
      Location:437512
      FN3; Fibronectin type 3 domain
      cd00063
      Location:622730
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam17971
      Location:30137
      LIFR_D2; Leukemia inhibitory factor receptor D2 domain
      pfam00041
      Location:332413
      fn3; Fibronectin type III domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      6843049..6904434 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036159232.1XP_036015125.1  oncostatin-M-specific receptor subunit beta isoform X1

      UniProtKB/Swiss-Prot
      O70458, O88821
      UniProtKB/TrEMBL
      B9EHD2, G3X8V6
      Conserved Domains (4) summary
      smart00060
      Location:437512
      FN3; Fibronectin type 3 domain
      cd00063
      Location:622730
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam17971
      Location:30137
      LIFR_D2; Leukemia inhibitory factor receptor D2 domain
      pfam00041
      Location:332413
      fn3; Fibronectin type III domain
    2. XM_006519973.5XP_006520036.1  oncostatin-M-specific receptor subunit beta isoform X1

      See identical proteins and their annotated locations for XP_006520036.1

      UniProtKB/Swiss-Prot
      O70458, O88821
      UniProtKB/TrEMBL
      B9EHD2, G3X8V6
      Conserved Domains (4) summary
      smart00060
      Location:437512
      FN3; Fibronectin type 3 domain
      cd00063
      Location:622730
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam17971
      Location:30137
      LIFR_D2; Leukemia inhibitory factor receptor D2 domain
      pfam00041
      Location:332413
      fn3; Fibronectin type III domain
    3. XM_030248385.2XP_030104245.1  oncostatin-M-specific receptor subunit beta isoform X2

      UniProtKB/TrEMBL
      B9EHD2
      Conserved Domains (3) summary
      smart00060
      Location:270345
      FN3; Fibronectin type 3 domain
      cd00063
      Location:455563
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cl21522
      Location:63122
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

    RNA

    1. XR_004938808.1 RNA Sequence