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    Zfp696 zinc finger protein 696 [ Mus musculus (house mouse) ]

    Gene ID: 100043133, updated on 2-Apr-2024

    Summary

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    Official Symbol
    Zfp696provided by MGI
    Official Full Name
    zinc finger protein 696provided by MGI
    Primary source
    MGI:MGI:2442738
    See related
    Ensembl:ENSMUSG00000062944 AllianceGenome:MGI:2442738
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    GLI4; 9130023H24Rik
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    Genomic context

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    See Zfp696 in Genome Data Viewer
    Location:
    7 F3; 7 70.06 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (127833623..127837203, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (128234451..128238031, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene integrin, alpha D Neighboring gene RIKEN cDNA 4931431B13 gene Neighboring gene STARR-positive B cell enhancer ABC_E10479 Neighboring gene cytochrome c oxidase subunit 6A2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:135380811-135380920 Neighboring gene STARR-positive B cell enhancer ABC_E2253 Neighboring gene STARR-positive B cell enhancer ABC_E8212 Neighboring gene armadillo repeat containing 5 Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:135396171-135396397 Neighboring gene transforming growth factor beta 1 induced transcript 1 Neighboring gene solute carrier family 5 (sodium/glucose cotransporter), member 2 Neighboring gene RUS family member 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mouse brain organization revealed through direct genome-scale TF expression analysis. Gray PA, et al. Science, 2004 Dec 24. PMID 15618518
    2. Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Hansen GM, et al. Genome Res, 2008 Oct. PMID 18799693, Free PMC Article
    3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    GLI-Kruppel family member GLI4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_177001.3 → NP_795975.1  GLI-Kruppel family member GLI4

      See identical proteins and their annotated locations for NP_795975.1

      Status: VALIDATED

      Source sequence(s)
      AK033604, AK084086, BB040432
      Consensus CDS
      CCDS40151.1
      UniProtKB/TrEMBL
      Q8BG98
      Related
      ENSMUSP00000077867.4, ENSMUST00000078816.5
      Conserved Domains (4) summary
      COG5048
      Location:111 → 270
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:174 → 194
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:144 → 166
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:214 → 238
      zf-H2C2_2; Zinc-finger double domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      127833623..127837203 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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