These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

1. NM_022857.1 → NP_074048.1  DNA binding protein N5

   See identical proteins and their annotated locations for NP_074048.1

   Status: PROVISIONAL

   Description

   Transcript Variant: This variant (1, coding) represents the functional allele that is not present in some strains, including the strain of the reference genome.

   Source sequence(s)

   L31882

   UniProtKB/TrEMBL

   Q63359

RNA

1. NR_171896.1 RNA Sequence

   Status: VALIDATED

   Description

   Transcript Variant: This variant (1, non-coding) contains a premature stop codon, and represents the non-functional allele present in some strains, including the strain of the reference genome. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, coding, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).

   Source sequence(s)

   JAXUCZ010000004

The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference GRCr8

Genomic

1. NC_086022.1 Reference GRCr8

   Range

   59867824..59870023 complement

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)