U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ASP2 aspartate aminotransferase 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832075, updated on 25-Apr-2024

    Summary

    Gene symbol
    ASP2
    Gene description
    aspartate aminotransferase 2
    Primary source
    Araport:AT5G19550
    Locus tag
    AT5G19550
    See related
    TAIR:AT5G19550
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AAT2; ASPARTATE AMINOTRANSFERASE; aspartate aminotransferase 2; ASPARTATE AMINOTRANSFERASE 2; ASPAT; CYTOPLASMIC ISOZYME 1; T20D1.70; T20D1_70
    Summary
    Nitrogen metabolism. Major cytosolic isoenzyme controlling aspartate biosynthesis in the light.
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See ASP2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    12
    Sequence:
    Chromosome: 5; NC_003076.8 (6597971..6601971)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene mechanosensitive channel of small conductance-like 9 Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene thermosome subunit gamma Neighboring gene ROP uanine nucleotide exchange factor 10 Neighboring gene uncharacterized protein

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_121960.5

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in 2-oxoglutarate metabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in aspartate metabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within cellular response to hypoxia HEP PubMed 
    involved_in glutamate metabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_or_within metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 

    General protein information

    Preferred Names
    aspartate aminotransferase 2
    NP_197456.1
    • aspartate aminotransferase 2 (ASP2); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity, copper ion binding; INVOLVED IN: nitrogen compound metabolic process; LOCATED IN: cytosol, cell wall, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 3 (TAIR:AT5G11520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      6597971..6601971
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121960.5NP_197456.1  aspartate aminotransferase 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197456.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P46645
      UniProtKB/TrEMBL
      A0A178UCN1, A0A384KI72, Q1EBW2
      Conserved Domains (1) summary
      PLN02397
      Location:1403
      PLN02397; aspartate transaminase