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    AT5G57200 ENTH/ANTH/VHS superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835826, updated on 15-Oct-2023

    Summary

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    Gene symbol
    AT5G57200
    Gene description
    ENTH/ANTH/VHS superfamily protein
    Primary source
    Araport:AT5G57200
    Locus tag
    AT5G57200
    See related
    TAIR:AT5G57200
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MJB24.1; MJB24_1
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    Genomic context

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    See AT5G57200 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    14
    Sequence:
    Chromosome: 5; NC_003076.8 (23177525..23180853)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene chloroplast import apparatus 2 Neighboring gene phosphatidylserine decarboxylase 2 Neighboring gene Ypt/Rab-GAP domain of gyp1p superfamily protein Neighboring gene cytochrome P450, family 81, subfamily F, polypeptide 2 Neighboring gene Thioredoxin superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables 1-phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables clathrin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in clathrin coat assembly IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in clathrin-dependent endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plastid HDA PubMed 

    General protein information

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    Preferred Names
    ENTH/ANTH/VHS superfamily protein
    NP_200530.1
    • ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: N-terminal protein myristoylation, clathrin coat assembly; LOCATED IN: clathrin coat; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT4G25940.1); Has 13426 Blast hits to 6658 proteins in 473 species: Archae - 43; Bacteria - 452; Metazoa - 5386; Fungi - 950; Plants - 797; Viruses - 658; Other Eukaryotes - 5140 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      23177525..23180853
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125102.2 → NP_200530.1  ENTH/ANTH/VHS superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200530.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LVD8
      UniProtKB/TrEMBL
      A0A178U8V1, A0A7G2FL30
      Conserved Domains (1) summary
      pfam07651
      Location:31 → 306
      ANTH; ANTH domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LVD8.1

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