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    Apeg3 antisense paternally expressed gene 3 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 619476, updated on 13-Apr-2024

    Summary

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    Symbol
    Apeg3provided by RGD
    Full Name
    antisense paternally expressed gene 3provided by RGD
    Primary source
    RGD:1563921
    See related
    AllianceGenome:RGD:1563921
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
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    Genomic context

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    See Apeg3 in Genome Data Viewer
    Location:
    1q12
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (76154484..76155415, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (67121402..67122333, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (70234160..70235091, complement)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene microRNA 3099 Neighboring gene small nucleolar RNA SNORA40 Neighboring gene paternally expressed 3 Neighboring gene zinc finger, imprinted 1 Neighboring gene olfactory receptor pseudogene 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. APeg3, a novel paternally expressed gene 3 antisense RNA transcript specifically expressed in vasopressinergic magnocellular neurons in the rat supraoptic nucleus. Glasgow E, et al. Brain Res Mol Brain Res, 2005 Jun 13. PMID 15950772
    2. APeg3: regulation of Peg3 through an evolutionarily conserved ncRNA. Frey WD, et al. Gene, 2014 May 1. PMID 24582979, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The 1-kb APeg3 mRNA was determined by 5' and 3' RACE, and contains an open reading frame that predicts a protein of 93 amino acids. This mRNA is predominantly expressed in VP-MCNs (vasopressinergic magnocellular neurons).
      Title: APeg3, a novel paternally expressed gene 3 antisense RNA transcript specifically expressed in vasopressinergic magnocellular neurons in the rat supraoptic nucleus.
    Submit: New GeneRIF Correction

    General gene information

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    Markers

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_130955.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      76154484..76155415 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001034160.1: Suppressed sequence

      Description
      NM_001034160.1: This RefSeq was permanently suppressed because the predicted protein is not well supported.
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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