U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    C8h15orf61 similar to human chromosome 15 open reading frame 61 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 363074, updated on 5-Mar-2024

    Summary

    Official Symbol
    C8h15orf61provided by RGD
    Official Full Name
    similar to human chromosome 15 open reading frame 61provided by RGD
    Primary source
    RGD:1309779
    See related
    Ensembl:ENSRNOG00000008340 AllianceGenome:RGD:1309779
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1309779
    Summary
    Orthologous to human C15orf61 (chromosome 15 open reading frame 61). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in Testes (RPKM 78.5), Kidney (RPKM 78.5) and 9 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See C8h15orf61 in Genome Data Viewer
    Location:
    8q24
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (72763513..72768248, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (63868125..63872863, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (68308286..68312975, complement)

    Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene SKI family transcriptional corepressor 1 Neighboring gene mitogen activated protein kinase kinase 5 Neighboring gene uncharacterized LOC134480190 Neighboring gene uncharacterized LOC102547003 Neighboring gene 60S ribosomal protein L37-like Neighboring gene IQ motif containing H Neighboring gene uncharacterized LOC134480189

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    uncharacterized protein C15orf61 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001108766.1NP_001102236.1  uncharacterized protein C15orf61 homolog precursor

      See identical proteins and their annotated locations for NP_001102236.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473975
      UniProtKB/TrEMBL
      A6J599, D3ZSK9
      Related
      ENSRNOP00000059786.3, ENSRNOT00000066106.3
      Conserved Domains (1) summary
      pfam15031
      Location:29154
      DUF4528; Domain of unknown function (DUF4528)

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086026.1 Reference GRCr8

      Range
      72763513..72768248 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063265761.1XP_063121831.1  uncharacterized protein C15orf61 homolog isoform X1