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    Gm40466 predicted gene, 40466 [ Mus musculus (house mouse) ]

    Gene ID: 105244944, updated on 16-Mar-2024

    Summary

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    Official Symbol
    Gm40466provided by MGI
    Official Full Name
    predicted gene, 40466provided by MGI
    Primary source
    MGI:MGI:5623351
    See related
    AllianceGenome:MGI:5623351
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm36166; Gm45695
    Expression
    Ubiquitous expression in genital fat pad adult (RPKM 3.1), limb E14.5 (RPKM 2.5) and 28 other tissues See more
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    Genomic context

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    Location:
    8 A2; 8
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (20555621..20593814)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 9530057J20 gene Neighboring gene mitochondrial import receptor subunit TOM20 homolog Neighboring gene POTE ankyrin domain family member F-like Neighboring gene predicted gene, 53405

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000074.7 Chromosome 8 Reference GRCm39 C57BL/6J

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. Stryke D, et al. Nucleic Acids Res, 2003 Jan 1. PMID 12520002, Free PMC Article
    2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_188736.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC168205

    2. NR_188737.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC168205

    3. NR_190331.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC168205

    4. NR_190332.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC168205

    5. NR_190333.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC168205

    6. NR_190334.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC168205

    7. NR_190335.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC168205

    8. NR_190336.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC168205

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      20555621..20593814
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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