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    Miga2 mitoguardin 2 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 296623, updated on 13-Apr-2024

    Summary

    Official Symbol
    Miga2provided by RGD
    Official Full Name
    mitoguardin 2provided by RGD
    Primary source
    RGD:1310887
    See related
    Ensembl:ENSRNOG00000017513 AllianceGenome:RGD:1310887
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Fam73b; RGD1310887
    Summary
    Predicted to enable protein heterodimerization activity and protein homodimerization activity. Predicted to be involved in mitochondrial fusion. Predicted to act upstream of or within bone development. Predicted to be integral component of plasma membrane. Orthologous to human MIGA2 (mitoguardin 2). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in Heart (RPKM 165.3), Adrenal (RPKM 138.7) and 9 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    Location:
    3p12
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (34034018..34056703)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (13636235..13658895)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (8928484..8951189)

    Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene nucleoporin 188 Neighboring gene SH3 domain-containing GRB2-like endophilin B2 Neighboring gene ribosomal protein L38 like 5 Neighboring gene U2 spliceosomal RNA Neighboring gene dolichyldiphosphatase 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables protein heterodimerization activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein homodimerization activity ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within bone development ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in mitochondrial fusion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in mitochondrial fusion ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in mitochondrial outer membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    mitoguardin 2
    Names
    family with sequence similarity 73, member B

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001106566.2NP_001100036.1  mitoguardin 2 isoform 2

      See identical proteins and their annotated locations for NP_001100036.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000003
      UniProtKB/TrEMBL
      A6JTY2, D3Z899
      Related
      ENSRNOP00000062428.1, ENSRNOT00000065300.4
      Conserved Domains (1) summary
      pfam10265
      Location:31529
      DUF2217; Uncharacterized conserved protein (DUF2217)
    2. NM_001399326.1NP_001386255.1  mitoguardin 2 isoform 1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000003
      UniProtKB/TrEMBL
      A0A0G2KAE6, A6JTY1
      Related
      ENSRNOP00000075370.1, ENSRNOT00000088509.2
      Conserved Domains (1) summary
      pfam10265
      Location:31568
      Miga; Mitoguardin

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086021.1 Reference GRCr8

      Range
      34034018..34056703
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063283490.1XP_063139560.1  mitoguardin 2 isoform X2

    2. XM_006233782.4XP_006233844.1  mitoguardin 2 isoform X1

      See identical proteins and their annotated locations for XP_006233844.1

      UniProtKB/TrEMBL
      A0A0G2KAE6, A6JTY1
      Conserved Domains (1) summary
      pfam10265
      Location:31568
      Miga; Mitoguardin

    RNA

    1. XR_010064604.1 RNA Sequence