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    CG15824 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33272, updated on 10-May-2024

    Summary

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    Official Symbol
    CG15824provided by FlyBase
    Primary source
    FLYBASE:FBgn0031292
    Locus tag
    Dmel_CG15824
    See related
    AllianceGenome:FB:FBgn0031292
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG15824
    Summary
    Human ortholog(s) of this gene implicated in primary ciliary dyskinesia 5. Orthologous to human HYDIN (HYDIN axonemal central pair apparatus protein). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    See CG15824 in Genome Data Viewer
    Location:
    21E2-21E2; 2-1.5 cM
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (877172..885141, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (877172..885141, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene dribble Neighboring gene Phosphatase 1 nuclear targeting subunit Neighboring gene neither inactivation nor afterpotential A Neighboring gene long non-coding RNA:CR45348 Neighboring gene Larval serum protein 1 beta

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Polymorphism and Divergence of Novel Gene Expression Patterns in Drosophila melanogaster. Cridland JM, et al. Genetics, 2020 Sep. PMID 32737121, Free PMC Article
    2. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article
    3. Systematic genetic analysis of muscle morphogenesis and function in Drosophila. Schnorrer F, et al. Nature, 2010 Mar 11. PMID 20220848
    4. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
    5. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article

    See all (18) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG15824-PB
    CG15824-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      877172..885141 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001298626.1 → NP_001285555.1  uncharacterized protein Dmel_CG15824, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285555.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VPV1

    2. NM_134711.2 → NP_608555.2  uncharacterized protein Dmel_CG15824, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608555.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VPV1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6NQW9 Q6NQW9
    Q9VPV1 Q9VPV1

    Gene LinkOut

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