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    CG31988 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 326182, updated on 4-Apr-2024

    Summary

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    Official Symbol
    CG31988provided by FlyBase
    Primary source
    FLYBASE:FBgn0051988
    Locus tag
    Dmel_CG31988
    See related
    AllianceGenome:FB:FBgn0051988
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-WO0140519.26; bs21c01.y1; CG17401; Dmel\CG31988
    Summary
    Predicted to enable transcription coregulator activity. Predicted to be active in cytosol; focal adhesion; and plasma membrane. Orthologous to human FHL3 (four and a half LIM domains 3) and FHL5 (four and a half LIM domains 5). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    39B1-39B2; 2-54 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (21201493..21202802, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (21201493..21202802, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Minichromosome maintenance 10 Neighboring gene Ret oncogene Neighboring gene uncharacterized protein Neighboring gene clumsy Neighboring gene small nuclear RNA U4 at 39B Neighboring gene Autophagy-related 18b

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Roles of the LIM Domain Proteins in Drosophila Cardiac and Hematopoietic Morphogenesis. She M, et al. Front Cardiovasc Med, 2021. PMID 33681304, Free PMC Article
    2. Evolution of alternative splicing in newly evolved genes of Drosophila. Zhan Z, et al. Gene, 2011 Jan 1. PMID 20851753
    3. Conserved properties of Drosophila and human spermatozoal mRNA repertoires. Fischer BE, et al. Proc Biol Sci, 2012 Jul 7. PMID 22378807, Free PMC Article
    4. Gene discovery using computational and microarray analysis of transcription in the Drosophila melanogaster testis. Andrews J, et al. Genome Res, 2000 Dec. PMID 11116097, Free PMC Article
    5. Somatic, germline and sex hierarchy regulated gene expression during Drosophila metamorphosis. Lebo MS, et al. BMC Genomics, 2009 Feb 13. PMID 19216785, Free PMC Article

    See all (24) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG31988-PA
    CG31988-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      21201493..21202802 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001299193.1 → NP_001286122.1  uncharacterized protein Dmel_CG31988, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286122.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q6AWE9, Q8T0V8
      Conserved Domains (2) summary
      cd08368
      Location:126 → 176
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
      cl02475
      Location:66 → 118
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

    2. NM_136254.4 → NP_610098.1  uncharacterized protein Dmel_CG31988, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610098.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q6AWE9, Q8T0V8
      Related
      FBpp0081018
      Conserved Domains (2) summary
      cd08368
      Location:126 → 176
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
      cl02475
      Location:66 → 118
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8T0V8 Q8T0V8

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