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    C8h11orf65 similar to human chromosome 11 open reading frame 65 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 315665, updated on 3-Apr-2024

    Summary

    Official Symbol
    C8h11orf65provided by RGD
    Official Full Name
    similar to human chromosome 11 open reading frame 65provided by RGD
    Primary source
    RGD:1311251
    See related
    Ensembl:ENSRNOG00000007266 AllianceGenome:RGD:1311251
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Mfi; RGD1311251
    Summary
    Predicted to be involved in negative regulation of mitochondrial fission and negative regulation of protein targeting to mitochondrion. Predicted to be located in cytosol and mitochondrial outer membrane. Orthologous to human C11orf65 (chromosome 11 open reading frame 65). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in Testes (RPKM 91.4), Liver (RPKM 46.0) and 3 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    8q24
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (62692123..62720951)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (53796033..53825277)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (57983168..58012474)

    Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene exophilin 5 Neighboring gene uncharacterized LOC120094158 Neighboring gene protein O-glucosyltransferase 3 Neighboring gene ATM serine/threonine kinase Neighboring gene uncharacterized LOC120094159 Neighboring gene nuclear protein, co-activator of histone transcription

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General gene information

    Markers

    Clone Names

    • MGC108787

    Gene Ontology Provided by RGD

    Process Evidence Code Pubs
    involved_in negative regulation of mitochondrial fission ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of mitochondrial fission ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in negative regulation of protein targeting to mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of protein targeting to mitochondrion ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosol ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in mitochondrial outer membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in mitochondrial outer membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    protein MFI
    Names
    mitochondrial fission factor interactor
    protein C11orf65 homolog
    uncharacterized protein C11orf65 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001024265.1NP_001019436.1  protein MFI

      See identical proteins and their annotated locations for NP_001019436.1

      Status: VALIDATED

      Source sequence(s)
      BC092578
      UniProtKB/Swiss-Prot
      Q569B9
      UniProtKB/TrEMBL
      A0A8I6GIL5, A6J4J2
      Related
      ENSRNOP00000009562.6, ENSRNOT00000009562.7
      Conserved Domains (1) summary
      cd21090
      Location:9263
      C11orf65; chromosome 11 open reading frame 65 and homologs

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086026.1 Reference GRCr8

      Range
      62692123..62720951
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006243077.5XP_006243139.1  protein MFI isoform X1

      UniProtKB/TrEMBL
      A0A0H2UHE9, A0A8I6ABL8
      Related
      ENSRNOP00000090340.1
    2. XM_063265464.1XP_063121534.1  protein MFI isoform X2

      UniProtKB/Swiss-Prot
      Q569B9
      UniProtKB/TrEMBL
      A6J4J2
    3. XM_006243080.5XP_006243142.1  protein MFI isoform X2

      See identical proteins and their annotated locations for XP_006243142.1

      UniProtKB/Swiss-Prot
      Q569B9
      UniProtKB/TrEMBL
      A0A8I6GIL5, A6J4J2
      Conserved Domains (1) summary
      cd21090
      Location:9263
      C11orf65; chromosome 11 open reading frame 65 and homologs
    4. XM_006243079.5XP_006243141.1  protein MFI isoform X2

      See identical proteins and their annotated locations for XP_006243141.1

      UniProtKB/Swiss-Prot
      Q569B9
      UniProtKB/TrEMBL
      A0A8I6GIL5, A6J4J2
      Conserved Domains (1) summary
      cd21090
      Location:9263
      C11orf65; chromosome 11 open reading frame 65 and homologs
    5. XM_006243078.5XP_006243140.1  protein MFI isoform X2

      See identical proteins and their annotated locations for XP_006243140.1

      UniProtKB/Swiss-Prot
      Q569B9
      UniProtKB/TrEMBL
      A0A8I6GIL5, A6J4J2
      Conserved Domains (1) summary
      cd21090
      Location:9263
      C11orf65; chromosome 11 open reading frame 65 and homologs