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    CG3625 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33198, updated on 26-Apr-2024

    Summary

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    Official Symbol
    CG3625provided by FlyBase
    Primary source
    FLYBASE:FBgn0031245
    Locus tag
    Dmel_CG3625
    See related
    AllianceGenome:FB:FBgn0031245
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG3625
    Summary
    Predicted to be integral component of membrane. Predicted to be active in endomembrane system. Is expressed in several structures, including Bolwig organ; ectoderm anlage; embryonic/larval garland cell; extended germ band embryo; and presumptive embryonic/larval system. Orthologous to several human genes including AIG1 (androgen induced 1). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    21B7-21B7; 2-0.5 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (283385..291795, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (283385..291795, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene smoothened Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR46262 Neighboring gene antisense RNA:CR46263 Neighboring gene amnionless Neighboring gene uncharacterized protein Neighboring gene U2 small nuclear riboprotein auxiliary factor 38 Neighboring gene Stress induced phosphoprotein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Microarray analysis of replicate populations selected against a wing-shape correlation in Drosophila melanogaster. Weber KE, et al. Genetics, 2008 Feb. PMID 18245369, Free PMC Article
    2. Distinct mechanisms of transcriptional pausing orchestrated by GAGA factor and M1BP, a novel transcription factor. Li J, et al. EMBO J, 2013 Jul 3. PMID 23708796, Free PMC Article
    3. Promoter-Proximal Chromatin Domain Insulator Protein BEAF Mediates Local and Long-Range Communication with a Transcription Factor and Directly Activates a Housekeeping Promoter in Drosophila. Dong Y, et al. Genetics, 2020 May. PMID 32179582, Free PMC Article
    4. Sex-Specific Transcript Diversity in the Fly Head Is Established during Pupal Stages and Adulthood and Is Largely Independent of the Mating Process and the Germline. Mohr C, et al. Sex Dev, 2017. PMID 28273663
    5. Copper homeostasis gene discovery in Drosophila melanogaster. Norgate M, et al. Biometals, 2007 Jun. PMID 17216353

    See all (38) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    is_active_in endomembrane system IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG3625-PA
    CG3625-PB
    CG3625-PC
    CG3625-PE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      283385..291795 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001258893.2 → NP_001245822.2  uncharacterized protein Dmel_CG3625, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001245822.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1A6S8, A8DYS6
      Conserved Domains (1) summary
      pfam04750
      Location:12 → 232
      Far-17a_AIG1; FAR-17a/AIG1-like protein

    2. NM_001103576.3 → NP_001097046.1  uncharacterized protein Dmel_CG3625, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097046.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1A6S8, A8DYS6
      Conserved Domains (1) summary
      pfam04750
      Location:12 → 232
      Far-17a_AIG1; FAR-17a/AIG1-like protein

    3. NM_134670.3 → NP_608514.1  uncharacterized protein Dmel_CG3625, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608514.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VPN0
      Related
      FBpp0077795
      Conserved Domains (1) summary
      pfam04750
      Location:17 → 233
      Far-17a_AIG1; FAR-17a/AIG1-like protein

    4. NM_164378.2 → NP_722622.1  uncharacterized protein Dmel_CG3625, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_722622.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      C6TP28, Q9VPN1
      Related
      FBpp0077794
      Conserved Domains (1) summary
      pfam04750
      Location:22 → 230
      Far-17a_AIG1; FAR-17a/AIG1-like protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A8DYS6 A8DYS6
    Q9VPN0 Q9VPN0
    Q9VPN1 Q9VPN1

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