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    yciG stress-induced bacterial acidophilic repeat motifs-containing protein YciG [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947489, updated on 27-Aug-2023

    Summary

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    Gene symbol
    yciG
    Gene description
    stress-induced bacterial acidophilic repeat motifs-containing protein YciG
    Primary source
    ASAP:ABE-0004229
    Locus tag
    b1259
    See related
    ECOCYC:EG11127
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1253
    Summary
    ymdF and yciG are paralogs. [More information is available at EcoGene: EG11127]. Transcription of yciG is induced by sulfometuron methyl, an herbicide that inhibits acetolactate synthase, by salicylate , and by high salt conditions . [More information is available at EcoCyc: EG11127].
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    Genomic context

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    Sequence:
    NC_000913.3 (1315856..1316035, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF892 domain-containing protein YciE Neighboring gene DUF892 domain-containing protein YciF Neighboring gene tryptophan synthase subunit alpha Neighboring gene tryptophan synthase subunit beta Neighboring gene fused indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Constricted flux through the branched-chain amino acid biosynthetic enzyme acetolactate synthase triggers elevated expression of genes regulated by rpoS and internal acidification. Van Dyk TK, et al. J Bacteriol, 1998 Feb. PMID 9473030, Free PMC Article
    2. Molecular evolution of the Escherichia coli chromosome. I. Analysis of structure and natural variation in a previously uncharacterized region between trp and tonB. Stoltzfus A, et al. Genetics, 1988 Oct. PMID 3058546, Free PMC Article
    3. Function of the Escherichia coli nucleoid protein, H-NS: molecular analysis of a subset of proteins whose expression is enhanced in a hns deletion mutant. Yoshida T, et al. Mol Gen Genet, 1993 Feb. PMID 8455549
    4. Climbing the protein ladder. Dovichi NJ. Nat Biotechnol, 2004 Oct. PMID 15470461
    5. Genome-wide analysis of the general stress response network in Escherichia coli: sigmaS-dependent genes, promoters, and sigma factor selectivity. Weber H, et al. J Bacteriol, 2005 Mar. PMID 15716429, Free PMC Article

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within bacterial-type flagellum-dependent swarming motility IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    stress-induced bacterial acidophilic repeat motifs-containing protein YciG

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1315856..1316035 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415775.4 stress-induced bacterial acidophilic repeat motifs-containing protein YciG [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415775.4

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P21361
      Conserved Domains (1) summary
      COG3729
      Location:1 → 43
      GsiB; General stress protein YciG, contains tandem KGG domains [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version

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