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    ssuA aliphatic sulfonate ABC transporter periplasmic binding protein [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945560, updated on 4-Feb-2024

    Summary

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    Gene symbol
    ssuA
    Gene description
    aliphatic sulfonate ABC transporter periplasmic binding protein
    Primary source
    ASAP:ABE-0003180
    Locus tag
    b0936
    See related
    ECOCYC:G6478
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0927; ycbO
    Summary
    First 21 aa are predicted to be a type I signal peptide. [More information is available at EcoGene: EG13707]. SsuA is the periplasmic substrate-binding component of the alkanesulfonate ABC transporter. [More information is available at EcoCyc: G6478].
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    Genomic context

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    Sequence:
    NC_000913.3 (995985..996944, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene aminopeptidase N Neighboring gene aliphatic sulfonate ABC transporter ATP binding subunit Neighboring gene aliphatic sulfonate ABC transporter membrane subunit Neighboring gene FMNH2-dependent alkanesulfonate monooxygenase Neighboring gene NADPH-dependent FMN reductase Neighboring gene putative laminin-binding fimbrial subunit Neighboring gene putative fimbrial chaperone ElfD

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sulfonate-sulfur metabolism and its regulation in Escherichia coli. van der Ploeg JR, et al. Arch Microbiol, 2001 Jul. PMID 11479697
    2. Deletion analysis of the Escherichia coli taurine and alkanesulfonate transport systems. Eichhorn E, et al. J Bacteriol, 2000 May. PMID 10781534, Free PMC Article
    3. The switch from inorganic to organic sulphur assimilation in Escherichia coli: adenosine 5'-phosphosulphate (APS) as a signalling molecule for sulphate excess. Bykowski T, et al. Mol Microbiol, 2002 Mar. PMID 11918818
    4. The Escherichia coli ssuEADCB gene cluster is required for the utilization of sulfur from aliphatic sulfonates and is regulated by the transcriptional activator Cbl. van Der Ploeg JR, et al. J Biol Chem, 1999 Oct 8. PMID 10506196
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables ATPase-coupled transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in cellular response to sulfur starvation NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within sulfur compound metabolic process IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    located_in outer membrane-bounded periplasmic space RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    located_in periplasmic space IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    aliphatic sulfonate ABC transporter periplasmic binding protein
    NP_415456.4

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      995985..996944 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415456.4 aliphatic sulfonate ABC transporter periplasmic binding protein [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415456.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5B9A8W8
      Conserved Domains (1) summary
      PRK11553
      Location:1 → 313
      PRK11553; alkanesulfonate transporter substrate-binding subunit; Provisional
    Nucleotide Protein
    Heading Accession and Version

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