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    yraI putative fimbrial chaperone YraI [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947657, updated on 6-Oct-2023

    Summary

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    Gene symbol
    yraI
    Gene description
    putative fimbrial chaperone YraI
    Primary source
    ASAP:ABE-0010331
    Locus tag
    b3143
    See related
    ECOCYC:G7638
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3131
    Summary
    YraI has Ig-like domains: pfam PF00345 aligns to N-terminal residues 25-142, and pfam PF02753 aligns to C-terminal residues 149-227. [More information is available at EcoGene: EG12774]. YraI is a hypothetical protein. [More information is available at EcoCyc: G7638].
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    Genomic context

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    Sequence:
    NC_000913.3 (3288090..3288785)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative deaminase AgaI Neighboring gene putative fimbrial protein YraH Neighboring gene putative fimbrial usher protein YraJ Neighboring gene putative fimbrial adhesin YraK

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Random insertion of a TetR-inducing peptide tag into Escherichia coli proteins allows analysis of protein levels by induction of reporter gene expression. Schlicht M, et al. Appl Environ Microbiol, 2006 Aug. PMID 16885321, Free PMC Article
    2. Conserved immunoglobulin-like features in a family of periplasmic pilus chaperones in bacteria. Holmgren A, et al. EMBO J, 1992 Apr. PMID 1348692, Free PMC Article
    3. The beta-barrel finder (BBF) program, allowing identification of outer membrane beta-barrel proteins encoded within prokaryotic genomes. Zhai Y, et al. Protein Sci, 2002 Sep. PMID 12192075, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    involved_in cell wall organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in chaperone-mediated protein folding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in outer membrane-bounded periplasmic space IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in periplasmic space IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative fimbrial chaperone YraI

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3288090..3288785
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417612.1 putative fimbrial chaperone YraI [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417612.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A377DKZ9, A0A6N8R2A9
      Conserved Domains (1) summary
      COG3121
      Location:1 → 229
      FimC; P pilus assembly protein, chaperone PapD [Extracellular structures]
    Nucleotide Protein
    Heading Accession and Version

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