Ostc oligosaccharyltransferase complex non-catalytic subunit [Rattus norvegicus (Norway rat)] - Gene

Summary

Official Symbol: Ostcprovided by RGD
Official Full Name: oligosaccharyltransferase complex non-catalytic subunitprovided by RGD
Primary source: RGD:1560708
See related: Ensembl:ENSRNOG00000023322 AllianceGenome:RGD:1560708
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Rattus norvegicus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as: Dc2; RGD1560708
Summary: Predicted to be involved in protein glycosylation. Predicted to be integral component of membrane. Predicted to be part of oligosaccharyltransferase complex. Orthologous to human OSTC (oligosaccharyltransferase complex non-catalytic subunit). [provided by Alliance of Genome Resources, Apr 2022]
Expression: Biased expression in Liver (RPKM 479.5), Heart (RPKM 286.9) and 9 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: 2q43

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCr8 (GCF_036323735.1)	2	NC_086020.1 (221924727..221940253, complement)
RS_2023_06	previous assembly	mRatBN7.2 (GCF_015227675.2)	2	NC_051337.1 (219250549..219266076, complement)
106	previous assembly	Rnor_6.0 (GCF_000001895.5)	2	NC_005101.4 (235816328..235831651, complement)

Chromosome 2 - NC_086020.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
BioProject: PRJNA238328
Publication: PMID 24510058
Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by RGD

Process	Evidence Code	Pubs
involved_in protein glycosylation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of oligosaccharyltransferase complex	IBA Inferred from Biological aspect of Ancestor more info
part_of oligosaccharyltransferase complex	IEA Inferred from Electronic Annotation more info
part_of oligosaccharyltransferase complex	ISO Inferred from Sequence Orthology more info

General protein information

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Preferred Names: oligosaccharyltransferase complex subunit OSTC

Names: oligosaccharyltransferase complex subunit (non-catalytic)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.