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    LOC4347256 uncharacterized LOC4347256 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4347256, updated on 18-Aug-2023

    Summary

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    Gene symbol
    LOC4347256
    Gene description
    uncharacterized LOC4347256
    Locus tag
    OSNPB_090456100
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Expression
    Broad expression in flowers (RPKM 7.2), flower buds (RPKM 7.0) and 4 other tissues See more
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    Genomic context

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    See LOC4347256 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    102 current IRGSP-1.0 (GCF_001433935.1) 9 NC_029264.1 (17182668..17188325)

    Chromosome 9 - NC_029264.1Genomic Context describing neighboring genes Neighboring gene 2-hydroxyisoflavanone dehydratase Neighboring gene tuliposide A-converting enzyme b1, amyloplastic Neighboring gene bZIP transcription factor TRAB1-like Neighboring gene uncharacterized LOC4347258

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_029264.1 Chromosome 9 Reference IRGSP-1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC4347256
    Names
    B1342C04.25
    Os09g0456100
    P0025H07.44
    remorin protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IRGSP-1.0 Primary Assembly

    Genomic

    1. NC_029264.1 Reference IRGSP-1.0 Primary Assembly

      Range
      17182668..17188325
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015755306.2 → XP_015610792.1  uncharacterized protein LOC4347256

      UniProtKB/TrEMBL
      B8BCK7, Q67TQ6, Q67U79
      Conserved Domains (1) summary
      pfam03763
      Location:507 → 610
      Remorin_C; Remorin, C-terminal region

    2. XM_015755305.2 → XP_015610791.1  uncharacterized protein LOC4347256

      UniProtKB/TrEMBL
      B8BCK7, Q67TQ6, Q67U79
      Conserved Domains (1) summary
      pfam03763
      Location:507 → 610
      Remorin_C; Remorin, C-terminal region
    Nucleotide Protein
    Heading Accession and Version

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