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    LOC4349134 molybdate-anion transporter [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4349134, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC4349134
    Gene description
    molybdate-anion transporter
    Locus tag
    OSNPB_100519600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    ASY
    Expression
    Broad expression in flowers (RPKM 36.4), flower buds (RPKM 25.3) and 6 other tissues See more
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    Genomic context

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    Location:
    chromosome: 10
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    102 current IRGSP-1.0 (GCF_001433935.1) 10 NC_029265.1 (20091711..20095010)

    Chromosome 10 - NC_029265.1Genomic Context describing neighboring genes Neighboring gene DNA excision repair protein ERCC-1 Neighboring gene AAA-ATPase At2g46620 Neighboring gene mitochondrial import inner membrane translocase subunit TIM23-2 Neighboring gene uncharacterized LOC4349136

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_029265.1 Chromosome 10 Reference IRGSP-1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables molybdate ion transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in molybdate ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    molybdate-anion transporter
    Names
    ABNORMAL SHOOT IN YOUTH
    DUF791 domain protein
    Os10g0519600

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IRGSP-1.0 Primary Assembly

    Genomic

    1. NC_029265.1 Reference IRGSP-1.0 Primary Assembly

      Range
      20091711..20095010
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015759409.2 → XP_015614895.1  molybdate-anion transporter

      UniProtKB/TrEMBL
      A0A0P0XWW8, B8BHW5, Q0IWC1, Q337A9, Q7XCQ6, Q9FWD6
      Conserved Domains (1) summary
      pfam05631
      Location:4 → 357
      MFS_5; Sugar-tranasporters, 12 TM
    Nucleotide Protein
    Heading Accession and Version

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