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    LOC4332937 cytochrome P450 709B2 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4332937, updated on 21-Dec-2023

    Summary

    Gene symbol
    LOC4332937
    Gene description
    cytochrome P450 709B2
    Locus tag
    OSNPB_030370900
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Expression
    Ubiquitous expression in leaves after flowering (RPKM 17.2), roots after flowering (RPKM 13.6) and 6 other tissues See more
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    Genomic context

    See LOC4332937 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    102 current IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (14552775..14556646)

    Chromosome 3 - NC_029258.1Genomic Context describing neighboring genes Neighboring gene H/ACA ribonucleoprotein complex subunit 4 Neighboring gene hydrophobic protein LTI6A-like Neighboring gene copper transporter 4-like Neighboring gene uncharacterized LOC107280431 Neighboring gene cytochrome P450 709B1-like Neighboring gene cytochrome P450 709B2-like

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_029258.1 Chromosome 3 Reference IRGSP-1.0 Primary Assembly

    Expression

    • Project title: Transcriptome profiling of various organs at different developmental stages in rice
    • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
    • BioProject: PRJNA243371
    • Publication: PMID 26387578
    • Analysis date: Fri Dec 15 20:02:59 2017

    General protein information

    Preferred Names
    cytochrome P450 709B2
    Names
    Os03g0370900

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001424245.1NP_001411174.1  cytochrome P450 709B2

      Status: VALIDATED

      Source sequence(s)
      AK101513, AK120700, AP014959, CI241507
      UniProtKB/TrEMBL
      A0A5S6R919, Q0DRM3, Q10KT5, Q9FRC3

    RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IRGSP-1.0 Primary Assembly

    Genomic

    1. NC_029258.1 Reference IRGSP-1.0 Primary Assembly

      Range
      14552775..14556646
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015775224.1XP_015630710.1  cytochrome P450 709B2

      Conserved Domains (1) summary
      cd20641
      Location:80510
      CYP709; cytochrome P450 family 709