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    SBF1 SET binding factor 1 [ Gallus gallus (chicken) ]

    Gene ID: 417071, updated on 3-Apr-2024

    Summary

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    Symbol
    SBF1provided by CGNC
    Full Name
    SET binding factor 1provided by CGNC
    Primary source
    CGNC:9447
    See related
    Ensembl:ENSGALG00010006372
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See SBF1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    46
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (1119024..1180429, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (1124719..1184379, complement)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene DENN domain containing 6B Neighboring gene protein phosphatase 6, regulatory subunit 2 Neighboring gene microRNA 1651 Neighboring gene uncharacterized LOC121109567 Neighboring gene adrenomedullin 2 Neighboring gene myo-inositol oxygenase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcriptome analysis for the chicken based on 19,626 finished cDNA sequences and 485,337 expressed sequence tags. Hubbard SJ, et al. Genome Res, 2005 Jan. PMID 15590942, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    myotubularin-related protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      1119024..1180429 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040662796.2 → XP_040518730.1  myotubularin-related protein 5 isoform X10

      UniProtKB/TrEMBL
      A0A1D5PEM8
      Conserved Domains (6) summary
      smart00801
      Location:363 → 431
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00799
      Location:120 → 309
      DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
      smart00800
      Location:17 → 87
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      cd01235
      Location:1841 → 1946
      PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
      cd13340
      Location:889 → 1007
      PH-GRAM_MTMR5; Myotubularian (MTM) related 5 protein (MTMR5) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd14588
      Location:1172 → 1575
      PTP-MTMR5; protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 5

    2. XM_040662735.2 → XP_040518669.1  myotubularin-related protein 5 isoform X8

      UniProtKB/TrEMBL
      A0A8V0XY64
      Conserved Domains (6) summary
      smart00801
      Location:384 → 452
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00799
      Location:141 → 330
      DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
      smart00800
      Location:38 → 108
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      cd01235
      Location:1862 → 1967
      PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
      cd13340
      Location:910 → 1028
      PH-GRAM_MTMR5; Myotubularian (MTM) related 5 protein (MTMR5) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd14588
      Location:1193 → 1596
      PTP-MTMR5; protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 5

    3. XM_040662789.1 → XP_040518723.1  myotubularin-related protein 5 isoform X14

      UniProtKB/TrEMBL
      A0A8V0XVC6
      Related
      ENSGALP00010008956.1, ENSGALT00010015252.1
      Conserved Domains (6) summary
      smart00801
      Location:355 → 423
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00799
      Location:120 → 301
      DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
      smart00800
      Location:17 → 87
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      cd01235
      Location:1750 → 1855
      PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
      cd13340
      Location:881 → 999
      PH-GRAM_MTMR5; Myotubularian (MTM) related 5 protein (MTMR5) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd14588
      Location:1138 → 1484
      PTP-MTMR5; protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 5

    4. XM_040662807.1 → XP_040518741.1  myotubularin-related protein 5 isoform X15

      UniProtKB/TrEMBL
      A0A1D5PSZ3
      Related
      ENSGALP00010008946.1, ENSGALT00010015230.1
      Conserved Domains (6) summary
      smart00801
      Location:355 → 423
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00799
      Location:120 → 301
      DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
      smart00800
      Location:17 → 87
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      cd01235
      Location:1781 → 1886
      PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
      cd13340
      Location:881 → 999
      PH-GRAM_MTMR5; Myotubularian (MTM) related 5 protein (MTMR5) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd14588
      Location:1138 → 1515
      PTP-MTMR5; protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 5

    5. XM_040662725.1 → XP_040518659.1  myotubularin-related protein 5 isoform X7

      UniProtKB/TrEMBL
      A0A8V0XY64
      Related
      ENSGALP00010008959.1, ENSGALT00010015259.1
      Conserved Domains (6) summary
      smart00801
      Location:355 → 423
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00799
      Location:120 → 301
      DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
      smart00800
      Location:17 → 87
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      cd01235
      Location:1807 → 1912
      PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
      cd13340
      Location:881 → 999
      PH-GRAM_MTMR5; Myotubularian (MTM) related 5 protein (MTMR5) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd14588
      Location:1138 → 1541
      PTP-MTMR5; protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 5

    6. XM_040662688.1 → XP_040518622.1  myotubularin-related protein 5 isoform X3

      UniProtKB/TrEMBL
      A0A1D5PEM8
      Conserved Domains (6) summary
      smart00801
      Location:355 → 423
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00799
      Location:120 → 301
      DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
      smart00800
      Location:17 → 87
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      cd01235
      Location:1833 → 1938
      PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
      cd13340
      Location:881 → 999
      PH-GRAM_MTMR5; Myotubularian (MTM) related 5 protein (MTMR5) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd14588
      Location:1164 → 1567
      PTP-MTMR5; protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 5

    7. XM_040662681.1 → XP_040518615.1  myotubularin-related protein 5 isoform X2

      UniProtKB/TrEMBL
      A0A1D5PEM8
      Conserved Domains (6) summary
      smart00801
      Location:363 → 431
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00799
      Location:120 → 309
      DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
      smart00800
      Location:17 → 87
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      cd01235
      Location:1840 → 1945
      PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
      cd13340
      Location:888 → 1006
      PH-GRAM_MTMR5; Myotubularian (MTM) related 5 protein (MTMR5) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd14588
      Location:1171 → 1574
      PTP-MTMR5; protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 5

    8. XM_040662779.1 → XP_040518713.1  myotubularin-related protein 5 isoform X13

      UniProtKB/TrEMBL
      A0A8V0XVB0
      Related
      ENSGALP00010008941.1, ENSGALT00010015217.1
      Conserved Domains (6) summary
      smart00801
      Location:363 → 431
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00799
      Location:120 → 309
      DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
      smart00800
      Location:17 → 87
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      cd01235
      Location:1758 → 1863
      PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
      cd13340
      Location:889 → 1007
      PH-GRAM_MTMR5; Myotubularian (MTM) related 5 protein (MTMR5) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd14588
      Location:1146 → 1492
      PTP-MTMR5; protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 5

    9. XM_040662760.1 → XP_040518694.1  myotubularin-related protein 5 isoform X11

      UniProtKB/TrEMBL
      A0A8V0XQI1
      Related
      ENSGALP00010008952.1, ENSGALT00010015243.1
      Conserved Domains (6) summary
      smart00801
      Location:363 → 431
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00799
      Location:120 → 309
      DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
      smart00800
      Location:17 → 87
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      cd01235
      Location:1784 → 1889
      PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
      cd13340
      Location:889 → 1007
      PH-GRAM_MTMR5; Myotubularian (MTM) related 5 protein (MTMR5) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd14588
      Location:1146 → 1518
      PTP-MTMR5; protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 5

    10. XM_040662745.1 → XP_040518679.1  myotubularin-related protein 5 isoform X9

      UniProtKB/TrEMBL
      A0A1D5PSZ3
      Conserved Domains (6) summary
      smart00801
      Location:363 → 431
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00799
      Location:120 → 309
      DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
      smart00800
      Location:17 → 87
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      cd01235
      Location:1789 → 1894
      PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
      cd13340
      Location:889 → 1007
      PH-GRAM_MTMR5; Myotubularian (MTM) related 5 protein (MTMR5) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd14588
      Location:1146 → 1523
      PTP-MTMR5; protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 5

    11. XM_040662698.1 → XP_040518632.1  myotubularin-related protein 5 isoform X4

      UniProtKB/TrEMBL
      A0A8V0XY64
      Conserved Domains (6) summary
      smart00801
      Location:363 → 431
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00799
      Location:120 → 309
      DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
      smart00800
      Location:17 → 87
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      cd01235
      Location:1815 → 1920
      PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
      cd13340
      Location:889 → 1007
      PH-GRAM_MTMR5; Myotubularian (MTM) related 5 protein (MTMR5) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd14588
      Location:1146 → 1549
      PTP-MTMR5; protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 5

    12. XM_040662770.1 → XP_040518704.1  myotubularin-related protein 5 isoform X12

      UniProtKB/TrEMBL
      A0A8V0XVB0
      Conserved Domains (6) summary
      smart00801
      Location:363 → 431
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00799
      Location:120 → 309
      DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
      smart00800
      Location:17 → 87
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      cd01235
      Location:1784 → 1889
      PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
      cd13340
      Location:889 → 1007
      PH-GRAM_MTMR5; Myotubularian (MTM) related 5 protein (MTMR5) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd14588
      Location:1172 → 1518
      PTP-MTMR5; protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 5

    13. XM_040662714.1 → XP_040518648.1  myotubularin-related protein 5 isoform X6

      UniProtKB/TrEMBL
      A0A8V0XQI1
      Conserved Domains (6) summary
      smart00801
      Location:363 → 431
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00799
      Location:120 → 309
      DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
      smart00800
      Location:17 → 87
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      cd01235
      Location:1810 → 1915
      PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
      cd13340
      Location:889 → 1007
      PH-GRAM_MTMR5; Myotubularian (MTM) related 5 protein (MTMR5) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd14588
      Location:1172 → 1544
      PTP-MTMR5; protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 5

    14. XM_040662709.1 → XP_040518643.1  myotubularin-related protein 5 isoform X5

      UniProtKB/TrEMBL
      A0A1D5PEM8
      Conserved Domains (6) summary
      smart00801
      Location:363 → 431
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00799
      Location:120 → 309
      DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
      smart00800
      Location:17 → 87
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      cd01235
      Location:1815 → 1920
      PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
      cd13340
      Location:889 → 1007
      PH-GRAM_MTMR5; Myotubularian (MTM) related 5 protein (MTMR5) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd14588
      Location:1172 → 1549
      PTP-MTMR5; protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 5

    15. XM_015273039.4 → XP_015128525.1  myotubularin-related protein 5 isoform X1

      UniProtKB/TrEMBL
      A0A1D5PEM8
      Related
      ENSGALP00010008943.1, ENSGALT00010015220.1
      Conserved Domains (8) summary
      smart00801
      Location:362 → 430
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00800
      Location:1 → 86
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      cd01235
      Location:1840 → 1945
      PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
      cd13340
      Location:888 → 1006
      PH-GRAM_MTMR5; Myotubularian (MTM) related 5 protein (MTMR5) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      pfam00169
      Location:1844 → 1945
      PH; PH domain
      pfam02141
      Location:118 → 308
      DENN; DENN (AEX-3) domain
      pfam06602
      Location:1149 → 1608
      Myotub-related; Myotubularin-like phosphatase domain
      pfam12335
      Location:541 → 760
      SBF2; Myotubularin protein

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      1124719..1184379 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040659879.2 → XP_040515813.1  myotubularin-related protein 5 isoform X1

      UniProtKB/TrEMBL
      A0A1D5PEM8
      Conserved Domains (6) summary
      smart00801
      Location:362 → 430
      dDENN; Domain always found downstream of DENN domain, found in a variety of signalling proteins
      smart00799
      Location:119 → 308
      DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
      smart00800
      Location:1 → 86
      uDENN; Domain always found upstream of DENN domain, found in a variety of signalling proteins
      cd01235
      Location:1840 → 1945
      PH_Sbf1_hMTMR5; Set binding factor 1 (also called Human MTMR5) Pleckstrin Homology (PH) domain
      cd13340
      Location:888 → 1006
      PH-GRAM_MTMR5; Myotubularian (MTM) related 5 protein (MTMR5) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      cd14588
      Location:1171 → 1574
      PTP-MTMR5; protein tyrosine phosphatase-like pseudophosphatase domain of myotubularin related phosphoinositide phosphatase 5

    2. XM_046909580.1 → XP_046765536.1  myotubularin-related protein 5 isoform X16

    3. XM_046909579.1 → XP_046765535.1  myotubularin-related protein 5 isoform X16

    Nucleotide Protein Strain
    Heading Accession and Version

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