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    Cnrip1 cannabinoid receptor interacting protein 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 364208, updated on 25-Apr-2024

    Summary

    Official Symbol
    Cnrip1provided by RGD
    Official Full Name
    cannabinoid receptor interacting protein 1provided by RGD
    Primary source
    RGD:1308373
    See related
    Ensembl:ENSRNOG00000005326 AllianceGenome:RGD:1308373
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Crip1a; RGD1308373
    Summary
    Enables protein C-terminus binding activity and type 1 cannabinoid receptor binding activity. Predicted to be involved in negative regulation of signaling receptor activity. Predicted to be located in cytoplasm. Predicted to be active in plasma membrane. Orthologous to human CNRIP1 (cannabinoid receptor interacting protein 1). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in Brain (RPKM 222.3), Lung (RPKM 55.7) and 8 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Cnrip1 in Genome Data Viewer
    Location:
    14q22
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (95664435..95707062)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (91462877..91492739)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (100217547..100247235)

    Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene F-box protein 48 Neighboring gene uncharacterized LOC134481790 Neighboring gene pleckstrin Neighboring gene uncharacterized LOC120096673 Neighboring gene protein phosphatase 3, regulatory subunit B, alpha Neighboring gene uncharacterized LOC134481791 Neighboring gene partner of NOB1 homolog

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables type 1 cannabinoid receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables type 1 cannabinoid receptor binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables type 1 cannabinoid receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    is_active_in GABA-ergic synapse ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in glutamatergic synapse ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in presynapse ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    CB1 cannabinoid receptor-interacting protein 1
    Names
    CB1 cannabinoid receptor interacting
    CRIP-1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001014232.2NP_001014254.1  CB1 cannabinoid receptor-interacting protein 1

      See identical proteins and their annotated locations for NP_001014254.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000014
      UniProtKB/Swiss-Prot
      A2RQR5, Q5M7A7
      UniProtKB/TrEMBL
      A0A0G2K1I5, A6JPY5
      Related
      ENSRNOP00000007104.4, ENSRNOT00000007104.7
      Conserved Domains (1) summary
      pfam15043
      Location:4158
      CNRIP1; CB1 cannabinoid receptor-interacting protein 1

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086032.1 Reference GRCr8

      Range
      95664435..95707062
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063273439.1XP_063129509.1  CB1 cannabinoid receptor-interacting protein 1 isoform X1