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    LOC100909405 uncharacterized LOC100909405 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 100909405, updated on 29-Feb-2024

    Summary

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    Symbol
    LOC100909405provided by RGD
    Full Name
    uncharacterized LOC100909405provided by RGD
    Primary source
    RGD:6504246
    See related
    AllianceGenome:RGD:6504246
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Expression
    Biased expression in Lung (RPKM 27.5), Spleen (RPKM 25.7) and 9 other tissues See more
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    Genomic context

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    See LOC100909405 in Genome Data Viewer
    Location:
    11q21
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 11 NC_086029.1 (63543333..63549314)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 11 NC_051346.1 (50074560..50080929)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 11 NC_005110.4 (52546208..52552159)

    Chromosome 11 - NC_086029.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103693556 Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC120095653 Neighboring gene uncharacterized LOC102548829 Neighboring gene coiled-coil domain containing 54

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086029.1 Reference GRCr8

      Range
      63543333..63549314
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_595056.4 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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