U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Dnajc30 DnaJ heat shock protein family (Hsp40) member C30 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 368190, updated on 13-Apr-2024

    Summary

    Official Symbol
    Dnajc30provided by RGD
    Official Full Name
    DnaJ heat shock protein family (Hsp40) member C30provided by RGD
    Primary source
    RGD:1595783
    See related
    Ensembl:ENSRNOG00000031721 AllianceGenome:RGD:1595783
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Wbscr18
    Summary
    Predicted to be involved in brain development and regulation of mitochondrial ATP synthesis coupled proton transport. Predicted to be located in mitochondrial inner membrane. Human ortholog(s) of this gene implicated in Williams-Beuren syndrome and nuclear type mitochondrial complex I deficiency. Orthologous to human DNAJC30 (DnaJ heat shock protein family (Hsp40) member C30). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Dnajc30 in Genome Data Viewer
    Location:
    12q12
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 12 NC_086030.1 (27264861..27265940, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 12 NC_051347.1 (21628319..21629398, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 12 NC_005111.4 (24668398..24669464, complement)

    Chromosome 12 - NC_086030.1Genomic Context describing neighboring genes Neighboring gene MLX interacting protein-like Neighboring gene VPS37D subunit of ESCRT-I Neighboring gene small Cajal body-specific RNA 20 Neighboring gene BUD23, rRNA methyltransferase and ribosome maturation factor Neighboring gene syntaxin 1A

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    dnaJ homolog subfamily C member 30, mitochondrial
    Names
    DnaJ (Hsp40) homolog, subfamily C, member 30
    Williams-Beuren syndrome chromosome region 18
    dnaJ homolog subfamily C member 30

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001109024.3NP_001102494.1  dnaJ homolog subfamily C member 30, mitochondrial

      See identical proteins and their annotated locations for NP_001102494.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000012
      UniProtKB/TrEMBL
      A6J0F1, B2RYV0, M0R6A2
      Related
      ENSRNOP00000064946.1, ENSRNOT00000043393.4
      Conserved Domains (2) summary
      COG0484
      Location:44105
      DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
      pfam00226
      Location:43104
      DnaJ; DnaJ domain

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086030.1 Reference GRCr8

      Range
      27264861..27265940 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)