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    Krt24 keratin 24 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 287675, updated on 13-Apr-2024

    Summary

    Official Symbol
    Krt24provided by RGD
    Official Full Name
    keratin 24provided by RGD
    Primary source
    RGD:1303157
    See related
    Ensembl:ENSRNOG00000010970 AllianceGenome:RGD:1303157
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Ka24
    Summary
    Predicted to be a structural constituent of cytoskeleton. Predicted to be involved in intermediate filament-based process. Predicted to be located in keratin filament. Orthologous to human KRT24 (keratin 24). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Restricted expression toward (RPKM 4.2) See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    Location:
    10q31
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (84728350..84733486, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (84232163..84237299, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (87190184..87195075, complement)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene keratin 222 Neighboring gene uncharacterized LOC134480870 Neighboring gene uncharacterized LOC134480871 Neighboring gene keratin 25 Neighboring gene keratin 26

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables structural constituent of cytoskeleton TAS
    Traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in epithelial cell differentiation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in intermediate filament organization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in intermediate filament-based process TAS
    Traceable Author Statement
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoskeleton IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in intermediate filament TAS
    Traceable Author Statement
    more info
    PubMed 
    located_in keratin filament TAS
    Traceable Author Statement
    more info
    PubMed 

    General protein information

    Preferred Names
    keratin, type I cytoskeletal 24
    Names
    CK-24
    K24
    cytokeratin-24
    keratin 24, type I
    type I keratin KA24
    type I keratin-24

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001004131.2NP_001004131.1  keratin, type I cytoskeletal 24

      See identical proteins and their annotated locations for NP_001004131.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000010
      UniProtKB/Swiss-Prot
      Q6IFX1
      UniProtKB/TrEMBL
      A6HIX4
      Related
      ENSRNOP00000014851.6, ENSRNOT00000014851.8
      Conserved Domains (1) summary
      pfam00038
      Location:117427
      Filament; Intermediate filament protein

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      84728350..84733486 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)