U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Kap kidney androgen regulated protein [ Rattus norvegicus (Norway rat) ]

    Gene ID: 24937, updated on 13-Apr-2024

    Summary

    Official Symbol
    Kapprovided by RGD
    Official Full Name
    kidney androgen regulated proteinprovided by RGD
    Primary source
    RGD:2947
    See related
    Ensembl:ENSRNOG00000005858 AllianceGenome:RGD:2947
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Restricted expression toward (RPKM 25922.0) See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    4q42
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (168405981..168409032, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (166674595..166677639, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (167549922..167552973, complement)

    Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene proline rich 4 Neighboring gene zinc finger HIT domain-containing protein 3 pseudogene Neighboring gene esterase D, pseudogene 2 Neighboring gene ribosomal protein lateral stalk subunit P2, pseudogene 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    kidney androgen-regulated protein
    Names
    ARP

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_052802.2NP_434689.1  kidney androgen-regulated protein precursor

      See identical proteins and their annotated locations for NP_434689.1

      Status: PROVISIONAL

      Source sequence(s)
      JAXUCZ010000004
      UniProtKB/Swiss-Prot
      Q62781
      UniProtKB/TrEMBL
      A6IMC6
      Related
      ENSRNOP00000007806.1, ENSRNOT00000007806.3
      Conserved Domains (1) summary
      pfam15222
      Location:19120
      KAR; Kidney androgen-regulated

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086022.1 Reference GRCr8

      Range
      168405981..168409032 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063285571.1XP_063141641.1  kidney androgen-regulated protein isoform X1