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    Magea13 MAGE family member A13 [ Mus musculus (house mouse) ]

    Gene ID: 75352, updated on 8-Feb-2024

    Summary

    Official Symbol
    Magea13provided by MGI
    Official Full Name
    MAGE family member A13provided by MGI
    Primary source
    MGI:MGI:1922602
    See related
    Ensembl:ENSMUSG00000046180 AllianceGenome:MGI:1922602
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    mage-k1; 4930550L24Rik
    Summary
    Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to be located in cytosol and nuclear body. Predicted to be active in nucleus. Orthologous to several human genes including MAGEA13P (MAGE family member A13, pseudogene). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Restricted expression toward testis adult (RPKM 4.3) See more
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    Genomic context

    See Magea13 in Genome Data Viewer
    Location:
    X A6; X 33.18 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (57956821..57965664)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (58909356..58920305)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 25851 Neighboring gene STARR-seq mESC enhancer starr_47231 Neighboring gene karyopherin (importin) alpha 2 pseudogene Neighboring gene fibroblast growth factor 13 Neighboring gene microRNA 504 Neighboring gene predicted gene, 26487

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Clone Names

    • MGC107266

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    mage-k1
    Names
    novel MAGE family domain containing protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_023774.3NP_076263.1  mage-k1

      See identical proteins and their annotated locations for NP_076263.1

      Status: VALIDATED

      Source sequence(s)
      BC087920
      Consensus CDS
      CCDS40985.1
      UniProtKB/TrEMBL
      Q99PA7
      Related
      ENSMUSP00000051134.5, ENSMUST00000062542.5
      Conserved Domains (1) summary
      pfam01454
      Location:91259
      MAGE; MAGE family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      57956821..57965664
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)