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    WBP4 WW domain binding protein 4 [ Gallus gallus (chicken) ]

    Gene ID: 418829, updated on 6-Jun-2024

    Summary

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    Symbol
    WBP4provided by CGNC
    Full Name
    WW domain binding protein 4provided by CGNC
    Primary source
    CGNC:12723
    See related
    Ensembl:ENSGALG00010003113
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See WBP4 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (165730339..165752925)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (165816368..165838942)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene SGT1 homolog, MIS12 kinetochore complex assembly cochaperone Neighboring gene E74 like ETS transcription factor 1 Neighboring gene mitochondrial translation release factor 1 Neighboring gene microRNA 2127 Neighboring gene N(alpha)-acetyltransferase 16, NatA auxiliary subunit Neighboring gene regulator of cell cycle

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of precatalytic spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    WW domain-binding protein 4
    Names
    WBP-4
    WW domain binding protein 4 (formin binding protein 21)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001030824.2 → NP_001025995.2  WW domain-binding protein 4

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000027
      UniProtKB/Swiss-Prot
      Q5F457
      UniProtKB/TrEMBL
      A0A8V0XJB5
      Related
      ENSGALP00010004362.1, ENSGALT00010007254.1
      Conserved Domains (2) summary
      COG5104
      Location:126 → 207
      PRP40; Splicing factor [RNA processing and modification]
      pfam06220
      Location:8 → 44
      zf-U1; U1 zinc finger

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      165730339..165752925
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015275479.4 → XP_015130965.2  WW domain-binding protein 4 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XFC1
      Related
      ENSGALP00010004359.1, ENSGALT00010007250.1
      Conserved Domains (1) summary
      COG5104
      Location:75 → 156
      PRP40; Splicing factor [RNA processing and modification]

    2. XM_015275483.4 → XP_015130969.2  WW domain-binding protein 4 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XFC1
      Conserved Domains (1) summary
      COG5104
      Location:75 → 156
      PRP40; Splicing factor [RNA processing and modification]

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      165816368..165838942
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046908215.1 → XP_046764171.1  WW domain-binding protein 4 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XFC1

    2. XM_046908214.1 → XP_046764170.1  WW domain-binding protein 4 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XFC1
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5F457.1 GenPept UniProtKB/Swiss-Prot:Q5F457

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials