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    PTPRG protein tyrosine phosphatase, receptor type G [ Gallus gallus (chicken) ]

    Gene ID: 374208, updated on 6-Jun-2024

    Summary

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    Symbol
    PTPRGprovided by CGNC
    Full Name
    protein tyrosine phosphatase, receptor type Gprovided by CGNC
    Primary source
    CGNC:5422
    See related
    Ensembl:ENSGALG00010021043
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See PTPRG in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    30
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 12 NC_052543.1 (12908061..13282909)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 12 NC_052584.1 (12941916..13316804)

    Chromosome 12 - NC_052543.1Genomic Context describing neighboring genes Neighboring gene C3orf67 homolog Neighboring gene fragile histidine triad Neighboring gene uncharacterized LOC121106601 Neighboring gene uncharacterized LOC121106598 Neighboring gene microRNA 1550 Neighboring gene uncharacterized LOC121106600 Neighboring gene C3orf14 homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Receptor tyrosine phosphatase PTPγ is a regulator of spinal cord neurogenesis. Hashemi H, et al. Mol Cell Neurosci, 2011 Feb. PMID 21112398, Free PMC Article
    2. Analysis of chicken embryonic gonad expressed sequenced tags. Shin JH, et al. Anim Genet, 2006 Feb. PMID 16441308
    3. Development of a chicken 5 K microarray targeted towards immune function. Smith J, et al. BMC Genomics, 2006 Mar 13. PMID 16533398, Free PMC Article
    4. Expressed sequence tag analysis of Eimeria-stimulated intestinal intraepithelial lymphocytes in chickens. Min W, et al. Mol Biotechnol, 2005 Jun. PMID 15920284
    5. A comprehensive collection of chicken cDNAs. Boardman PE, et al. Curr Biol, 2002 Nov 19. PMID 12445392

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. PTPgamma therefore regulates neurogenesis during a window of spinal cord development
      Title: Receptor tyrosine phosphatase PTPγ is a regulator of spinal cord neurogenesis.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein tyrosine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    receptor-type tyrosine-protein phosphatase gamma
    Names
    R-PTP-gamma
    protein-tyrosine phosphatase gamma
    NP_001384360.1
    XP_046755716.1
    XP_046781914.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001397431.1 → NP_001384360.1  receptor-type tyrosine-protein phosphatase gamma precursor

      Status: VALIDATED

      Source sequence(s)
      AM064271, BU106810, BU245296, BU250654, BU300419, BU415611, BU417886, BU478851, CD740415, CD740441, CV859109, JAENSK010000252, U38349
      UniProtKB/Swiss-Prot
      Q98936

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052543.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      12908061..13282909
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046899760.1 → XP_046755716.1  receptor-type tyrosine-protein phosphatase gamma isoform X1

      UniProtKB/Swiss-Prot
      Q98936
      Related
      ENSGALP00010030117.1, ENSGALT00010050926.1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052584.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      12941916..13316804
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046925958.1 → XP_046781914.1  receptor-type tyrosine-protein phosphatase gamma isoform X1

      UniProtKB/Swiss-Prot
      Q98936

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_204314.2: Suppressed sequence

      Description
      NM_204314.2: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q98936.1 GenPept UniProtKB/Swiss-Prot:Q98936

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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    Research Materials