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    IKZF5 IKAROS family zinc finger 5 [ Gallus gallus (chicken) ]

    Gene ID: 430882, updated on 5-Mar-2024

    Summary

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    Official Symbol
    IKZF5provided by CGNC
    Official Full Name
    IKAROS family zinc finger 5provided by CGNC
    Primary source
    CGNC:1359
    See related
    Ensembl:ENSGALG00010001793
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    ZNFN1A5
    Orthologs
    human mouse all
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    Genomic context

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    See IKZF5 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 6 NC_052537.1 (32207535..32221855, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 6 NC_052578.1 (32098585..32112921, complement)

    Chromosome 6 - NC_052537.1Genomic Context describing neighboring genes Neighboring gene C10orf88 homolog Neighboring gene uncharacterized LOC121111182 Neighboring gene ADAM metallopeptidase domain 9-like Neighboring gene phosphoseryl-tRNA kinase Neighboring gene acyl-CoA dehydrogenase, short/branched chain Neighboring gene translation initiation factor IF-2-like Neighboring gene H6 family homeobox 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein Pegasus
    Names
    IKAROS family zinc finger 5 (Pegasus)
    ikaros family zinc finger protein 5
    zinc finger protein, subfamily 1A, 5 (Pegasus)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001031595.2 → NP_001026766.1  zinc finger protein Pegasus

      See identical proteins and their annotated locations for NP_001026766.1

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000232
      UniProtKB/Swiss-Prot
      Q5ZLR2
      Related
      ENSGALP00010002384.1, ENSGALT00010004087.1
      Conserved Domains (3) summary
      sd00017
      Location:84 → 104
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:124 → 148
      zf-H2C2_2; Zinc-finger double domain
      NF033913
      Location:223 → 354
      fibronec_FbpA; LPXTG-anchored fibronectin-binding protein FbpA

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052537.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      32207535..32221855 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040702490.2 → XP_040558424.1  zinc finger protein Pegasus isoform X1

      UniProtKB/Swiss-Prot
      Q5ZLR2
      Conserved Domains (3) summary
      sd00017
      Location:84 → 104
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:124 → 148
      zf-H2C2_2; Zinc-finger double domain
      NF033913
      Location:223 → 354
      fibronec_FbpA; LPXTG-anchored fibronectin-binding protein FbpA

    2. XM_046942971.1 → XP_046798927.1  zinc finger protein Pegasus isoform X1

      UniProtKB/Swiss-Prot
      Q5ZLR2

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052578.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      32098585..32112921 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046920401.1 → XP_046776357.1  zinc finger protein Pegasus isoform X1

      UniProtKB/Swiss-Prot
      Q5ZLR2

    2. XM_046920402.1 → XP_046776358.1  zinc finger protein Pegasus isoform X1

      UniProtKB/Swiss-Prot
      Q5ZLR2
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5ZLR2.1 GenPept UniProtKB/Swiss-Prot:Q5ZLR2

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials