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    TSHZ2 teashirt zinc finger homeobox 2 [ Gallus gallus (chicken) ]

    Gene ID: 419341, updated on 5-Mar-2024

    Summary

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    Symbol
    TSHZ2provided by CGNC
    Full Name
    teashirt zinc finger homeobox 2provided by CGNC
    Primary source
    CGNC:5905
    See related
    Ensembl:ENSGALG00010015734
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    ZNF218
    Orthologs
    human mouse all
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    Genomic context

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    See TSHZ2 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 20 NC_052551.1 (12889847..13103900, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 20 NC_052592.1 (12675895..12889817, complement)

    Chromosome 20 - NC_052551.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107054835 Neighboring gene zinc finger protein 217-like Neighboring gene uncharacterized LOC101751795 Neighboring gene ZFP64 zinc finger protein Neighboring gene uncharacterized LOC121107357 Neighboring gene microRNA 6677

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    teashirt homolog 2
    Names
    serologically defined colon cancer antigen 33 like
    teashirt family zinc finger 2
    zinc finger protein 218

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052551.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      12889847..13103900 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025142326.3 → XP_024998094.1  teashirt homolog 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YT24, A0A8V0YUX8
      Conserved Domains (2) summary
      cd00086
      Location:845 → 913
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
      sd00020
      Location:217 → 239
      ZF_C2H2; C2H2 Zn finger [structural motif]

    2. XM_025142325.3 → XP_024998093.1  teashirt homolog 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YUX8, F1NNH5
      Related
      ENSGALP00010021863.1, ENSGALT00010037880.1
      Conserved Domains (2) summary
      cd00086
      Location:845 → 913
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
      sd00020
      Location:217 → 239
      ZF_C2H2; C2H2 Zn finger [structural motif]

    3. XM_004947254.5 → XP_004947311.1  teashirt homolog 2 isoform X1

      See identical proteins and their annotated locations for XP_004947311.1

      UniProtKB/TrEMBL
      A0A8V0YUX8, F1NNH5
      Conserved Domains (2) summary
      cd00086
      Location:845 → 913
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
      sd00020
      Location:217 → 239
      ZF_C2H2; C2H2 Zn finger [structural motif]

    4. XM_040651078.2 → XP_040507012.1  teashirt homolog 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YUX8, F1NNH5
      Conserved Domains (2) summary
      cd00086
      Location:845 → 913
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
      sd00020
      Location:217 → 239
      ZF_C2H2; C2H2 Zn finger [structural motif]

    RNA

    1. XR_005841354.2 RNA Sequence

    2. XR_005841353.2 RNA Sequence

    3. XR_005841352.2 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052592.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      12675895..12889817 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040688377.2 → XP_040544311.1  teashirt homolog 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YT24, A0A8V0YUX8
      Conserved Domains (2) summary
      cd00086
      Location:845 → 913
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
      sd00020
      Location:217 → 239
      ZF_C2H2; C2H2 Zn finger [structural motif]

    2. XM_040688376.2 → XP_040544310.1  teashirt homolog 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YUX8, F1NNH5
      Conserved Domains (2) summary
      cd00086
      Location:845 → 913
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
      sd00020
      Location:217 → 239
      ZF_C2H2; C2H2 Zn finger [structural motif]

    3. XM_040688375.2 → XP_040544309.1  teashirt homolog 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YUX8, F1NNH5
      Conserved Domains (2) summary
      cd00086
      Location:845 → 913
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
      sd00020
      Location:217 → 239
      ZF_C2H2; C2H2 Zn finger [structural motif]

    4. XM_040688374.2 → XP_040544308.1  teashirt homolog 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YUX8, F1NNH5
      Conserved Domains (2) summary
      cd00086
      Location:845 → 913
      homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
      sd00020
      Location:217 → 239
      ZF_C2H2; C2H2 Zn finger [structural motif]

    RNA

    1. XR_005855429.2 RNA Sequence

    2. XR_005855428.2 RNA Sequence

    3. XR_005855427.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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