SLCO1C1 solute carrier organic anion transporter family member 1C1 [Gallus gallus (chicken)] - Gene

Summary

Symbol: SLCO1C1provided by CGNC
Full Name: solute carrier organic anion transporter family member 1C1provided by CGNC
Primary source: CGNC:9932
See related: Ensembl:ENSGALG00010015162
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
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Genomic context

Location:: chromosome: 1

Exon count:: 15

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	1	NC_052532.1 (65192656..65218287)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	1	NC_052573.1 (65515001..65540632)

Chromosome 1 - NC_052532.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

We have identified seven genes in which expression levels in different tissues were associated with eggshell color.
Title: Quantitative expression of candidate genes affecting eggshell color.
Oatp1c1 is expressed in the choroid plexus from day 3 to day 10 of development in chicken embryo.
Title: Dynamic mRNA distribution pattern of thyroid hormone transporters and deiodinases during early embryonic chicken brain development.

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables bile acid transmembrane transporter activity	IEA Inferred from Electronic Annotation more info	PubMed
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed
enables sodium-independent organic anion transmembrane transporter activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in bile acid and bile salt transport	IEA Inferred from Electronic Annotation more info	PubMed
involved_in sodium-independent organic anion transport	IEA Inferred from Electronic Annotation more info	PubMed
involved_in transmembrane transport	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: solute carrier organic anion transporter family member 1C1

Names: organic anion transporting polypeptide 1c1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001039097.2 → NP_001034186.2 solute carrier organic anion transporter family member 1C1

Status: VALIDATED

Source sequence(s)

JAENSK010000012

UniProtKB/TrEMBL

F1NQ63

Related

ENSGALP00010021289.1, ENSGALT00010036540.1