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    C14H10.2 JAKMIP_CC3 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 181234, updated on 12-Aug-2022

    Summary

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    Gene symbol
    C14H10.2
    Gene description
    JAKMIP_CC3 domain-containing protein
    Primary source
    WormBase:WBGene00007592
    Locus tag
    CELE_C14H10.2
    See related
    AllianceGenome:WB:WBGene00007592
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Orthologous to human JAKMIP3 (Janus kinase and microtubule interacting protein 3). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    chromosome: X
    Exon count:
    17
    Sequence:
    Chromosome: X; NC_003284.9 (10242325..10252881, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene Zrt (ZRT), Irt- (IRT-) like Protein Transporter Neighboring gene Seven TM Receptor Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. In Vivo Interaction Proteomics in Caenorhabditis elegans Embryos Provides New Insights into P Granule Dynamics. Chen JX, et al. Mol Cell Proteomics, 2016 May. PMID 26912668, Free PMC Article
    2. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    3. A map of the interactome network of the metazoan C. elegans. Li S, et al. Science, 2004 Jan 23. PMID 14704431, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    JAKMIP_CC3 domain-containing protein
    NP_001076754.1
    • Confirmed by transcript evidence
    NP_001359535.1
    • Confirmed by transcript evidence
    NP_001360623.1
    • Confirmed by transcript evidence
    NP_001360624.1
    • Confirmed by transcript evidence
    NP_001360625.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      10242325..10252881 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001373464.2 → NP_001360623.1  JAKMIP_CC3 domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A4V0ILK2
      Conserved Domains (2) summary
      COG1196
      Location:49 → 409
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:243 → 563
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    2. NM_001373465.1 → NP_001359535.1  JAKMIP_CC3 domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      G5EDI1
      Conserved Domains (2) summary
      COG1196
      Location:290 → 588
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam16034
      Location:157 → 347
      JAKMIP_CC3; JAKMIP CC3 domain

    3. NM_001373467.4 → NP_001360624.1  JAKMIP_CC3 domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A4V0IJY6
      Conserved Domains (2) summary
      COG1196
      Location:284 → 582
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam16034
      Location:151 → 341
      JAKMIP_CC3; JAKMIP CC3 domain

    4. NM_001373466.3 → NP_001360625.1  JAKMIP_CC3 domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A4V0IJU5
      Conserved Domains (2) summary
      COG1196
      Location:43 → 403
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:237 → 557
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    5. NM_001083285.5 → NP_001076754.1  JAKMIP_CC3 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001076754.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0G832
      Conserved Domains (1) summary
      TIGR02168
      Location:5 → 315
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    Nucleotide Protein
    Heading Accession and Version

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