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    Myh11 myosin, heavy polypeptide 11, smooth muscle [ Mus musculus (house mouse) ]

    Gene ID: 17880, updated on 11-Apr-2024

    Summary

    Official Symbol
    Myh11provided by MGI
    Official Full Name
    myosin, heavy polypeptide 11, smooth muscleprovided by MGI
    Primary source
    MGI:MGI:102643
    See related
    Ensembl:ENSMUSG00000018830 AllianceGenome:MGI:102643
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    SM1; SM2; smMHC
    Summary
    Enables cytoskeletal motor activity. Acts upstream of or within smooth muscle contraction. Located in brush border; smooth muscle contractile fiber; and stress fiber. Part of muscle myosin complex. Is expressed in several structures, including alimentary system; brain; cardiovascular system; genitourinary system; and liver and biliary system. Human ortholog(s) of this gene implicated in patent ductus arteriosus and thoracic aortic aneurysm. Orthologous to human MYH11 (myosin heavy chain 11). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in bladder adult (RPKM 911.5), colon adult (RPKM 71.0) and 1 other tissue See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    Location:
    16 A1; 16 9.71 cM
    Exon count:
    44
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (14012392..14109227, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (14194527..14292188, complement)

    Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E7428 Neighboring gene STARR-positive B cell enhancer ABC_E4155 Neighboring gene STARR-seq mESC enhancer starr_40176 Neighboring gene microRNA 484 Neighboring gene nudE neurodevelopment protein 1 Neighboring gene STARR-seq mESC enhancer starr_40179 Neighboring gene centrosomal protein 20 Neighboring gene STARR-seq mESC enhancer starr_40180 Neighboring gene ATP-binding cassette, sub-family C member 1 Neighboring gene predicted gene, 23116

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables actin filament binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables cytoskeletal motor activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables microfilament motor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables structural constituent of muscle ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in actomyosin structure organization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in cardiac muscle cell development ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in elastic fiber assembly ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within smooth muscle contraction IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within smooth muscle contraction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in brush border IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of muscle myosin complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of myosin II complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of myosin complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in myosin filament IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in smooth muscle contractile fiber IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in stress fiber IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    myosin-11
    Names
    myosin heavy chain 11, smooth muscle

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001161775.2NP_001155247.1  myosin-11 isoform 2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) lacks an alternate exon in the 3' coding region, compared to variant 1, that causes a frameshift. The resulting protein (isoform 2) has a longer and distinct C-terminus compared to isoform 1.
      Source sequence(s)
      AC164291
      Consensus CDS
      CCDS88881.1
      UniProtKB/TrEMBL
      E9QPE7, Q69ZX3
      Related
      ENSMUSP00000087756.5, ENSMUST00000090287.5
      Conserved Domains (8) summary
      cl14654
      Location:10201292
      V_Alix_like; Protein-interacting V-domain of mammalian Alix and related domains
      cd14921
      Location:99771
      MYSc_Myh11; class II myosin heavy chain 11, motor domain
      pfam00063
      Location:87771
      Myosin_head; Myosin head (motor domain)
      pfam01576
      Location:8481928
      Myosin_tail_1; Myosin tail
      pfam02736
      Location:3471
      Myosin_N; Myosin N-terminal SH3-like domain
      pfam16046
      Location:9901082
      FAM76; FAM76 protein
      cl23717
      Location:10661124
      crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...
      cl24005
      Location:17801867
      DUF2570; Protein of unknown function (DUF2570)
    2. NM_001402795.1NP_001389724.1  myosin-11 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC164291
      UniProtKB/TrEMBL
      A0A338P6K2
      Related
      ENSMUSP00000156021.2, ENSMUST00000231567.2
    3. NM_001402796.1NP_001389725.1  myosin-11 isoform 4

      Status: VALIDATED

      Source sequence(s)
      AC164291
    4. NM_013607.3NP_038635.2  myosin-11 isoform 1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript but encodes the shorter isoform (1).
      Source sequence(s)
      AC164291
      Consensus CDS
      CCDS27972.1
      UniProtKB/TrEMBL
      A0A2R8VHF9, Q69ZX3
      Related
      ENSMUSP00000155052.2, ENSMUST00000230397.2
      Conserved Domains (9) summary
      cl14654
      Location:10201292
      V_Alix_like; Protein-interacting V-domain of mammalian Alix and related domains
      cd14921
      Location:99771
      MYSc_Myh11; class II myosin heavy chain 11, motor domain
      pfam00063
      Location:87771
      Myosin_head; Myosin head (motor domain)
      pfam01576
      Location:8481928
      Myosin_tail_1; Myosin tail
      pfam02736
      Location:3471
      Myosin_N; Myosin N-terminal SH3-like domain
      pfam09798
      Location:18191935
      LCD1; DNA damage checkpoint protein
      pfam16046
      Location:9901082
      FAM76; FAM76 protein
      cl23717
      Location:10661124
      crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...
      cl24005
      Location:17801867
      DUF2570; Protein of unknown function (DUF2570)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000082.7 Reference GRCm39 C57BL/6J

      Range
      14012392..14109227 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006521845.1XP_006521908.1  myosin-11 isoform X3

      Conserved Domains (2) summary
      cl22853
      Location:131
      Motor_domain; Myosin and Kinesin motor domain
      pfam01576
      Location:1081188
      Myosin_tail_1; Myosin tail