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    Hdgfl1 HDGF like 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 171074, updated on 13-Apr-2024

    Summary

    Official Symbol
    Hdgfl1provided by RGD
    Official Full Name
    HDGF like 1provided by RGD
    Primary source
    RGD:621012
    See related
    AllianceGenome:RGD:621012
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Pwwp1; Hdgfrp1
    Summary
    Orthologous to human HDGFL1 (HDGF like 1). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

    Location:
    17p11
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 17 NC_086035.1 (38636053..38638049)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 17 NC_051352.1 (38207906..38209902)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 17 NC_005116.4 (40170522..40172518)

    Chromosome 17 - NC_086035.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L19, pseudogene 10 Neighboring gene thymine-DNA glycosylase, pseudogene 3 Neighboring gene uncharacterized LOC134482854 Neighboring gene pyruvate kinase M1/2, pseudogene 12

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    hepatoma-derived growth factor-like protein 1
    Names
    hepatoma derived growth factor-like 1
    hepatoma-derived growth factor, related protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_133549.3NP_598233.2  hepatoma-derived growth factor-like protein 1

      See identical proteins and their annotated locations for NP_598233.2

      Status: PROVISIONAL

      Source sequence(s)
      JAXUCZ010000017
      UniProtKB/TrEMBL
      Q5RKK8, Q7TNX5
      Conserved Domains (1) summary
      cd05834
      Location:885
      HDGF_related; The PWWP domain is an essential part of the Hepatoma Derived Growth Factor (HDGF) family of proteins, and is necessary for DNA binding by HDGF. This family of endogenous nuclear-targeted mitogens includes HRP (HDGF-related proteins 1, 2, 3, 4, or HPR1, ...

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086035.1 Reference GRCr8

      Range
      38636053..38638049
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)