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    Mkrn2os MKRN2 opposite strand [ Rattus norvegicus (Norway rat) ]

    Gene ID: 100361147, updated on 8-Mar-2024

    Summary

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    Symbol
    Mkrn2osprovided by RGD
    Full Name
    MKRN2 opposite strandprovided by RGD
    Primary source
    RGD:2320714
    See related
    Ensembl:ENSRNOG00000070957 AllianceGenome:RGD:2320714
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Orthologous to human MKRN2OS (MKRN2 opposite strand). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in Kidney (RPKM 30.1), Uterus (RPKM 5.8) and 8 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Mkrn2os in Genome Data Viewer
    Location:
    4q42
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 4 NC_086022.1 (150317116..150327559, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (148644489..148653396, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (147497139..147505339, complement)

    Chromosome 4 - NC_086022.1Genomic Context describing neighboring genes Neighboring gene peroxisome proliferator-activated receptor gamma Neighboring gene tRNA splicing endonuclease subunit 2 Neighboring gene makorin, ring finger protein, 2 Neighboring gene Raf-1 proto-oncogene, serine/threonine kinase Neighboring gene small nucleolar RNA SNORA17

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    MKRN2 opposite strand protein
    Names
    rCG29620-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086022.1 Reference GRCr8

      Range
      150317116..150327559 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008763263.3 → XP_008761485.1  MKRN2 opposite strand protein isoform X1

      UniProtKB/TrEMBL
      A0A8I6ADV6, A6IKY8
      Related
      ENSRNOP00000092553.1
      Conserved Domains (1) summary
      pfam16044
      Location:8 → 199
      DUF4796; Domain of unknown function (DUF4796)

    2. XM_039108781.2 → XP_038964709.1  MKRN2 opposite strand protein isoform X2

      Conserved Domains (1) summary
      pfam16044
      Location:10 → 135
      DUF4796; Domain of unknown function (DUF4796)
    Nucleotide Protein Strain
    Heading Accession and Version

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