U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    TAF3 Taf3p [ Saccharomyces cerevisiae S288C ]

    Gene ID: 856096, updated on 17-May-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    TAF3
    Gene description
    Taf3p
    Primary source
    FungiDB:YPL011C
    Locus tag
    YPL011C
    See related
    SGD:S000005932; AllianceGenome:SGD:S000005932; VEuPathDB:YPL011C
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Also known as
    TAF47
    Summary
    Enables chromatin binding activity. Involved in transcription by RNA polymerase II. Part of transcription factor TFIID complex. [provided by Alliance of Genome Resources, Apr 2022]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TAF3 in Genome Data Viewer
    Location:
    chromosome: XVI
    Exon count:
    1
    Sequence:
    Chromosome: XVI; NC_001148.4 (533642..534703, complement)

    Chromosome XVI - NC_001148.4Genomic Context describing neighboring genes Neighboring gene mitochondrial 37S ribosomal protein MRPS16 Neighboring gene mRNA-binding protein RRP12 Neighboring gene coatomer subunit zeta Neighboring gene Rqc2p

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_001148.4

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Mapping histone fold TAFs within yeast TFIID. Leurent C, et al. EMBO J, 2002 Jul 1. PMID 12093743, Free PMC Article
    2. Taf2 mediates DNA binding of Taf14. Klein BJ, et al. Nat Commun, 2022 Jun 8. PMID 35676274, Free PMC Article
    3. Genome-wide transcriptional dependence on TAF1 functional domains. Irvin JD, et al. J Biol Chem, 2006 Mar 10. PMID 16407318
    4. A SAGA-independent function of SPT3 mediates transcriptional deregulation in a mutant of the Ccr4-not complex in Saccharomyces cerevisiae. James N, et al. Genetics, 2007 Sep. PMID 17660549, Free PMC Article
    5. Histone folds mediate selective heterodimerization of yeast TAF(II)25 with TFIID components yTAF(II)47 and yTAF(II)65 and with SAGA component ySPT7. Gangloff YG, et al. Mol Cell Biol, 2001 Mar. PMID 11238921, Free PMC Article

    See all (52) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables chromatin binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in transcription by RNA polymerase II IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of protein-containing complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of transcription factor TFIID complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    Taf3p
    NP_015314.1
    • TFIID subunit (47 kDa); involved in promoter binding and RNA polymerase II transcription initiation

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001148.4 Reference assembly

      Range
      533642..534703 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001183825.1 → NP_015314.1  TPA: Taf3p [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_015314.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6W401, Q12297
      UniProtKB/TrEMBL
      A0A6A5Q182, A6ZWN5, B3LL51, B5VTF1, C7GU39, C8ZJ16, G2WPG9, N1NXD9
      Conserved Domains (1) summary
      smart00576
      Location:5 → 83
      BTP; Bromodomain transcription factors and PHD domain containing proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q12297.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools