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    ATG101 autophagy related 101 [ Canis lupus familiaris (dog) ]

    Gene ID: 486535, updated on 5-Mar-2024

    Summary

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    Official Symbol
    ATG101provided by VGNC
    Official Full Name
    autophagy related 101provided by VGNC
    Primary source
    VGNC:VGNC:38215
    See related
    Ensembl:ENSCAFG00845026809
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    C27H12orf44
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 27
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (2928791..2935881, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (43317316..43324391)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (43715530..43722606)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (2945425..2950072, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (2931788..2938961, complement)

    Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene keratin 80 Neighboring gene small integral membrane protein 41 Neighboring gene nuclear receptor subfamily 4 group A member 1 Neighboring gene trafficking regulator and scaffold protein tamalin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in autophagosome assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in autophagy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in phagophore assembly site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    autophagy-related protein 101; LOW QUALITY PROTEIN: autophagy-related protein 101

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051831.1 Reference ROS_Cfam_1.0

      Range
      2928791..2935881 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038438121.1 → XP_038294049.1  autophagy-related protein 101

      UniProtKB/TrEMBL
      A0A8C0JIV5, A0A8C0T0Q0, A0A8I3PT36, A0A8P0SUU4
      Related
      ENSCAFP00845037083.1, ENSCAFT00845047250.1
      Conserved Domains (1) summary
      pfam07855
      Location:9 → 172
      ATG101; Autophagy-related protein 101

    2. XM_038438122.1 → XP_038294050.1  autophagy-related protein 101

      UniProtKB/TrEMBL
      A0A8C0JIV5, A0A8C0T0Q0, A0A8I3PT36, A0A8P0SUU4
      Conserved Domains (1) summary
      pfam07855
      Location:9 → 172
      ATG101; Autophagy-related protein 101

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049287.1 Alternate UMICH_Zoey_3.1

      Range
      2945425..2950072 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038512816.1 → XP_038368744.1  LOW QUALITY PROTEIN: autophagy-related protein 101

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

      Range
      2931788..2938961 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038640578.1 → XP_038496506.1  autophagy-related protein 101

      Conserved Domains (1) summary
      pfam07855
      Location:9 → 172
      ATG101; Autophagy-related protein 101

    2. XM_038640579.1 → XP_038496507.1  autophagy-related protein 101

      Conserved Domains (1) summary
      pfam07855
      Location:9 → 172
      ATG101; Autophagy-related protein 101

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

      Range
      43715530..43722606
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038577724.1 → XP_038433652.1  autophagy-related protein 101

      UniProtKB/TrEMBL
      A0A8C0JIV5, A0A8C0T0Q0, A0A8I3PT36, A0A8P0SUU4
      Conserved Domains (1) summary
      pfam07855
      Location:9 → 172
      ATG101; Autophagy-related protein 101

    2. XM_038577725.1 → XP_038433653.1  autophagy-related protein 101

      UniProtKB/TrEMBL
      A0A8C0JIV5, A0A8C0T0Q0, A0A8I3PT36, A0A8P0SUU4
      Conserved Domains (1) summary
      pfam07855
      Location:9 → 172
      ATG101; Autophagy-related protein 101

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      43317316..43324391
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038460134.1 → XP_038316062.1  autophagy-related protein 101

      UniProtKB/TrEMBL
      A0A8C0JIV5, A0A8C0T0Q0, A0A8I3PT36, A0A8P0SUU4
      Conserved Domains (1) summary
      pfam07855
      Location:9 → 172
      ATG101; Autophagy-related protein 101

    2. XM_038460135.1 → XP_038316063.1  autophagy-related protein 101

      UniProtKB/TrEMBL
      A0A8C0JIV5, A0A8C0T0Q0, A0A8I3PT36, A0A8P0SUU4
      Conserved Domains (1) summary
      pfam07855
      Location:9 → 172
      ATG101; Autophagy-related protein 101
    Nucleotide Protein
    Heading Accession and Version

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