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    Tmem160 transmembrane protein 160 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 292654, updated on 30-Mar-2024

    Summary

    Official Symbol
    Tmem160provided by RGD
    Official Full Name
    transmembrane protein 160provided by RGD
    Primary source
    RGD:1564549
    See related
    Ensembl:ENSRNOG00000015304 AllianceGenome:RGD:1564549
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1564549
    Summary
    Predicted to be integral component of membrane. Orthologous to human TMEM160 (transmembrane protein 160). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in Brain (RPKM 154.1), Heart (RPKM 145.3) and 9 other tissues See more
    Orthologs
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    Genomic context

    Location:
    1q21
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (86292582..86295290)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (77164448..77167156)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (78417719..78420427)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene SUMO1 activating enzyme subunit 1 Neighboring gene ferritin light chain 1, pseudogene 12 Neighboring gene zinc finger CCCH-type containing 4 Neighboring gene neuronal PAS domain protein 1 Neighboring gene Rho GTPase activating protein 35 Neighboring gene G protein subunit gamma 5, pseudogene 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001106227.1NP_001099697.1  transmembrane protein 160

      See identical proteins and their annotated locations for NP_001099697.1

      Status: PROVISIONAL

      Source sequence(s)
      CH473979
      UniProtKB/TrEMBL
      A6J8B3, D3ZZU4
      Related
      ENSRNOP00000020609.4, ENSRNOT00000020609.6

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      86292582..86295290
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)